RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 PSMD13Q9UNM6 376 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 NTNG1Q9Y2I2 539 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 PADI2Q9Y2J8 665 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 SPO11Q9Y5K1 396 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 COPG1Q9Y678 874 aaKnown RBP7.97□□□□□ -1.13
USP39-216ENST00000490193 ANKRD12Q6UB98 2062 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 POLQO75417 2590 aa7.97□□□□□ -1.13
USP39-216ENST00000490193 DOCK10Q96BY6 2186 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 OR6C74A6NCV1 312 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 SLC9B1P1A6NJY1 282 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 C9J4A7 227 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 AURKAO14965 403 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 SLC4A1P02730 911 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 PYGMP11217 842 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 SKILP12757 684 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 PRF1P14222 555 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 NDUFS1P28331 727 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 PER3P56645 1201 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 XRCC4Q13426 336 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 ITGA9Q13797 1035 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 SSPNQ14714 243 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 PCSK7Q16549 785 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 STX1AQ16623 288 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 FIGNQ5HY92 759 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 DCAF10Q5QP82 559 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 ZFYVE27Q5T4F4 411 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 ARMC6Q6NXE6 501 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 SPOCD1Q6ZMY3 1216 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 VSIG1Q86XK7 387 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 GALNT16Q8N428 558 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 PLD5Q8N7P1 536 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 BEND7Q8N7W2 519 aaPredicted RBP7.96□□□□□ -1.14
USP39-216ENST00000490193 CLEC1AQ8NC01 280 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 GDAP1Q8TB36 358 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 TM9SF4Q92544 642 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 C12orf66Q96MD2 445 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 PPM1MQ96MI6 270 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 OLFM3Q96PB7 478 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 RNF157Q96PX1 679 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 C17orf62Q9BQA9 187 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 PITPNM3Q9BZ71 974 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 ILKAPQ9H0C8 392 aaPredicted RBP7.96□□□□□ -1.14
USP39-216ENST00000490193 AGPAT4Q9NRZ5 378 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 CHMP5Q9NZZ3 219 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 IL17CQ9P0M4 197 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 ACSL5Q9ULC5 683 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 BZW2Q9Y6E2 419 aaKnown RBP7.96□□□□□ -1.14
USP39-216ENST00000490193 F8P00451 2351 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 DCHS2Q6V1P9 2916 aa7.96□□□□□ -1.14
USP39-216ENST00000490193 MDC1Q14676 2089 aaKnown RBP7.95□□□□□ -1.14
USP39-216ENST00000490193 TACC2O95359 2948 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 ITPR3Q14573 2671 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 LOC285095A0A1B0GVY8 99 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 HEATR9A2RTY3 570 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 MGAT4DA6NG13 374 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 OR2AG2A6NM03 316 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 TMEM150CB9EJG8 249 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 H3BMH7 237 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 E2F3O00716 465 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 GAPDHSO14556 408 aaPredicted RBP7.95□□□□□ -1.14
USP39-216ENST00000490193 PROSCO94903 275 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 LCA5LO95447 670 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 MT-CYBP00156 380 aaPredicted RBP7.95□□□□□ -1.14
USP39-216ENST00000490193 CD63P08962 238 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 HBQ1P09105 142 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 SLC35G4P0C7Q5 338 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 POLR2CP19387 275 aaPredicted RBP7.95□□□□□ -1.14
USP39-216ENST00000490193 HLA-DPA1P20036 260 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 CYP2A7P20853 494 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 AGXTP21549 392 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 CDH3P22223 829 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 KDELR1P24390 212 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 ITGA3P26006 1051 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 SPAM1P38567 509 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 SSR1P43307 286 aaKnown RBP7.95□□□□□ -1.14
USP39-216ENST00000490193 PREPP48147 710 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 TAS2R40P59535 323 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 RAPSNQ13702 412 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 ZRSR2Q15696 482 aaKnown RBP7.95□□□□□ -1.14
USP39-216ENST00000490193 KYNUQ16719 465 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 LONRF2Q1L5Z9 754 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 PTCHD3Q3KNS1 767 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 GPRC6AQ5T6X5 926 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 SLC9A4Q6AI14 798 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 CCDC70Q6NSX1 233 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 DUS1LQ6P1R4 473 aaKnown RBP7.95□□□□□ -1.14
USP39-216ENST00000490193 FBXO38Q6PIJ6 1188 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 TMEM220Q6QAJ8 160 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 SASS6Q6UVJ0 657 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 CLEC17AQ6ZS10 378 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 CUZD1Q86UP6 607 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 KCNMB4Q86W47 210 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 ZGRF1Q86YA3 2104 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 CPNE8Q86YQ8 564 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 ZADH2Q8N4Q0 377 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 ACVR1CQ8NER5 493 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 OR2L2Q8NH16 312 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 SPATA22Q8NHS9 363 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 COG1Q8WTW3 980 aa7.95□□□□□ -1.14
USP39-216ENST00000490193 SYN2Q92777 582 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms