RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 PNPLA6Q8IY17 1366 aa2.9□□□□□ -1.95
UBXN4-208ENST00000490163 MAP2P11137 1827 aaKnown RBP2.9□□□□□ -1.95
UBXN4-208ENST00000490163 A0A1W2PRV1 198 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 KANSL1LA0AUZ9 987 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 OGG1O15527 345 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 CSDE1O75534 798 aaKnown RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 KRT33AO76009 404 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 REC8O95072 547 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 GH1P01241 217 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 ICAM1P05362 532 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 ETS1P14921 441 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 ERCC2P18074 760 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 EPHB2P29323 1055 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 METAP1P53582 386 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 CDK3Q00526 305 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 NHLH2Q02577 135 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 FOXL1Q12952 345 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 MELKQ14680 651 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 RABL3Q5HYI8 236 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 C20orf194Q5TEA3 1177 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 KLHL10Q6JEL2 608 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 LAYNQ6UX15 382 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 TMPRSS6Q8IU80 811 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 FOXRED2Q8IWF2 684 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 RNF148Q8N7C7 305 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 BEST2Q8NFU1 509 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 ROBO4Q8WZ75 1007 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 CADM1Q9BY67 442 aaKnown RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 NFKBIZQ9BYH8 718 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 FAM129AQ9BZQ8 928 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 CNOT10Q9H9A5 744 aaKnown RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 AURKAIP1Q9NWT8 199 aaPredicted RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 TSC22D4Q9Y3Q8 395 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 METP08581 1390 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 LAMB4A4D0S4 1761 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 ADAMTS20P59510 1910 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 A0A0G2JK05 382 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 ZSCAN5CA6NGD5 496 aaPredicted RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 MROH6A6NGR9 719 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 NME6O75414 186 aaPredicted RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 TADA2AO75478 443 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 TRUB2O95900 331 aaKnown RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 IL6RP08887 468 aaPredicted RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 MAP2K2P36507 400 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 DHPSP49366 369 aaPredicted RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 RGS7P49802 495 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 GBX2P52951 348 aaPredicted RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 RAE1P78406 368 aaKnown RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 KRT17Q04695 432 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 GOLGA8FQ08AF8 430 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 ST3GAL1Q11201 340 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 SCGB2A2Q13296 93 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 PDE7AQ13946 482 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 RRS1Q15050 365 aaKnown RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 ZKSCAN8Q15776 578 aaPredicted RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 SLC39A4Q6P5W5 647 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 TEX38Q6PEX7 206 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 SYNE3Q6ZMZ3 975 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 CCDC13Q8IYE1 715 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 WDR48Q8TAF3 677 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 RRNAD1Q96FB5 475 aaKnown RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 FBXL20Q96IG2 436 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 FYTTD1Q96QD9 318 aaKnown RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 NMNAT2Q9BZQ4 307 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 CLPBQ9H078 707 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 CARD9Q9H257 536 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 PLK3Q9H4B4 646 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 PLEKHG2Q9H7P9 1386 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 SRD5A3Q9H8P0 318 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 ENTPD7Q9NQZ7 604 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 GPR173Q9NS66 373 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 EHD3Q9NZN3 535 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 DISP3Q9P2K9 1392 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 NDRG3Q9UGV2 375 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 CASZ1Q86V15 1759 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 COL11A2P13942 1736 aaPredicted RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 TOGARAM1Q9Y4F4 1720 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 EDDM13A0A1B0GTR0 161 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 C2orf92A0A1B0GVN3 265 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 DUXAA6NLW8 204 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 H0YIV9 168 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 RASGRF2O14827 1237 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 CASQ2O14958 399 aaPredicted RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 CASC3O15234 703 aaKnown RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 RNMTO43148 476 aaKnown RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 CEP104O60308 925 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 CCNT1O60563 726 aaKnown RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 CHRNA1P02708 482 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 SAGP10523 405 aaPredicted RBP2.89□□□□□ -1.95
UBXN4-208ENST00000490163 CR2P20023 1033 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 LMAN1P49257 510 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 TPM4P67936 248 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 GRIK3Q13003 919 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 SYCP1Q15431 976 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 FAM214AQ32MH5 1076 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 SLC30A9Q6PML9 568 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 MFSD7Q6UXD7 560 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 NUDT13Q86X67 352 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 C11orf44Q8N8P7 122 aa2.89□□□□□ -1.95
UBXN4-208ENST00000490163 SCAIQ8N9R8 606 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms