RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 FRMD8Q9BZ67 464 aaPredicted RBP3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 FAM234AQ9H0X4 552 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 OSGEPL1Q9H4B0 414 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 PALMDQ9NP74 551 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 FBXO4Q9UKT5 387 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 CDH7Q9ULB5 785 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 SETD5Q9C0A6 1442 aa3.15□□□□□ -1.9
DEPDC1-204ENST00000489862 NEURL4Q96JN8 1562 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 SPATA31A1Q5TZJ5 1347 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 PREX1Q8TCU6 1659 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 A2ML1A8K2U0 1454 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 A0A1W2PRG0 241 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 TCRBV7S3A2A0A539 114 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 SLC22A23A1A5C7 686 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 ELOVL7A1L3X0 281 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 SLC9B1P1A6NJY1 282 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 H0YIG0 161 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 SLC33A1O00400 549 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 HCRTR2O43614 444 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 SELENOFO60613 162 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 PALMO75781 387 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 OAZ2O95190 189 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 TOMM40O96008 361 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 ABHD2P08910 425 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 CD63P08962 238 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 PKMP14618 531 aaKnown RBP3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 FUT1P19526 365 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 IL10P22301 178 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 POU1F1P28069 291 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 TMOD1P28289 359 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 HOXA7P31268 230 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 HOXA13P31271 388 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 ARL1P40616 181 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 STAT6P42226 847 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 HTR6P50406 440 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 ST8SIA6P61647 398 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 TRADDQ15628 312 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 ZKSCAN8Q15776 578 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 AARDQ4LEZ3 155 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 EPC2Q52LR7 807 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 C6orf136Q5SQH8 315 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 FAM91A1Q658Y4 838 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 PODNL1Q6PEZ8 512 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 GSG1LQ6UXU4 331 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 ZNF793Q6ZN11 406 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 C9orf47Q6ZRZ4 202 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 MSANTD1Q6ZTZ1 278 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 MDGA2Q7Z553 956 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 HAPLN4Q86UW8 402 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 DZIP1Q86YF9 867 aaKnown RBP3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 LPCAT1Q8NF37 534 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 NEK9Q8TD19 979 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 BRSK1Q8TDC3 778 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 GLMPQ8WWB7 406 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 GIMAP1Q8WWP7 306 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 PIGKQ92643 395 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 TEKT1Q969V4 418 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 MRPL1Q9BYD6 325 aaKnown RBP3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 MTMR12Q9C0I1 747 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 NT5C3AQ9H0P0 336 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 DPH5Q9H2P9 285 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 FAM212BQ9NTI7 297 aaPredicted RBP3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 TMEM45AQ9NWC5 275 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 DLGAP2Q9P1A6 1054 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 CTNNA3Q9UI47 895 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 KCNK6Q9Y257 313 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 CHKBQ9Y259 395 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 STRAPQ9Y3F4 350 aaKnown RBP3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 PKP3Q9Y446 797 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 IQGAP3Q86VI3 1631 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 MYO3AQ8NEV4 1616 aa3.15□□□□□ -1.91
DEPDC1-204ENST00000489862 CEP170BQ9Y4F5 1589 aaPredicted RBP3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 NSD2O96028 1365 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 TET3O43151 1660 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 GCC2Q8IWJ2 1684 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 ARHGAP23Q9P227 1491 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 PIK3C2BO00750 1634 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 FEZF1A0PJY2 475 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 MAGEB17A8MXT2 336 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 CCDC188H7C350 402 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 MCF2LO15068 1137 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 EIF3DO15371 548 aaKnown RBP eCLIP3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 NOL3O60936 208 aaKnown RBP3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 ZC3H11AO75152 810 aaKnown RBP eCLIP3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 CREG1O75629 220 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 CBX6O95503 412 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 SLC16A8O95907 504 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 OPN1MWP04001 364 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 ALDOAP04075 364 aaKnown RBP3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 FGF2P09038 288 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 OPN1MW2P0DN77 364 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 OPN1MW3P0DN78 364 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 TOP1P11387 765 aaKnown RBP3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 ST6GAL1P15907 406 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 ITIH1P19827 911 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 TNFRSF1BP20333 461 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 GDI1P31150 447 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 IDUAP35475 653 aa3.14□□□□□ -1.91
DEPDC1-204ENST00000489862 DEKP35659 375 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms