RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	DCAF12	Q5T6F0	453 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	ANKRD22	Q5VYY1	191 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	IRGC	Q6NXR0	463 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	XKR5	Q6UX68	686 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	CAND1	Q86VP6	1230 aa	Known RBP	10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	MPP5	Q8N3R9	675 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	ELMO1	Q92556	727 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	RSC1A1	Q92681	617 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	MFSD3	Q96ES6	412 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	CAPZA3	Q96KX2	299 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	DDA1	Q9BW61	102 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	RAB33B	Q9H082	229 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	OR52A5	Q9H2C5	316 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	KIR3DX1	Q9H7L2	352 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	SLC39A1	Q9NY26	324 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	SAMD15	Q9P1V8	674 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	EPHA6	Q9UF33	1036 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	SLC24A2	Q9UI40	661 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	SOX13	Q9UN79	622 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	PCDHB11	Q9Y5F2	797 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	PCDHGA3	Q9Y5H0	932 aa		10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	10.82	□□□□□ -0.68
GGA1-222	ENST00000489772	COL27A1	Q8IZC6	1860 aa	Predicted RBP	10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	GOLGA8M	H3BSY2	632 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	PFDN6	O15212	129 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	TMEM63A	O94886	807 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	VAPB	O95292	243 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	PDHA2	P29803	388 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	PAFAH1B1	P43034	410 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	PREP	P48147	710 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	LEPR	P48357	1165 aa	Known RBP	10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	TMPRSS3	P57727	454 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	CLN3	Q13286	438 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	SEMA3A	Q14563	771 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	MRNIP	Q6NTE8	343 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	ARMC6	Q6NXE6	501 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	DUS1L	Q6P1R4	473 aa	Known RBP	10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	CES3	Q6UWW8	571 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	FAM92B	Q6ZTR7	304 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	LDB1	Q86U70	411 aa	Predicted RBP	10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	OOSP2	Q86WS3	158 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	CREG2	Q8IUH2	290 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	PPIL6	Q8IXY8	311 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	OTUD6B	Q8N6M0	293 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	ACVR1C	Q8NER5	493 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	JPH3	Q8WXH2	748 aa	Predicted RBP	10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	SLCO2A1	Q92959	643 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	ART4	Q93070	314 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	RUNDC3B	Q96NL0	473 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	SERPINB12	Q96P63	405 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	TEFM	Q96QE5	360 aa	Known RBP	10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	FERD3L	Q96RJ6	166 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	DDX47	Q9H0S4	455 aa	Known RBP	10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	WDR70	Q9NW82	654 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	HRASLS2	Q9NWW9	162 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	OCIAD1	Q9NX40	245 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	FOXJ2	Q9P0K8	574 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	MARCH4	Q9P2E8	410 aa	Predicted RBP	10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	ASIC3	Q9UHC3	531 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	PCYOX1	Q9UHG3	505 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	ZFYVE26	Q68DK2	2539 aa		10.81	□□□□□ -0.68
GGA1-222	ENST00000489772	MYLK	Q15746	1914 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	OR5K3	A6NET4	321 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	STMND1	H3BQB6	276 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	PRMT5	O14744	637 aa	Predicted RBP	10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	NDUFS3	O75489	264 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	LIPC	P11150	499 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	MC2R	Q01718	297 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	PRKAA1	Q13131	559 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	PTK6	Q13882	451 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	BOP1	Q14137	746 aa	Known RBP	10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	BRD3	Q15059	726 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	DNTTIP2	Q5QJE6	756 aa	Known RBP	10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	RNF187	Q5TA31	235 aa	Predicted RBP	10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	CACHD1	Q5VU97	1274 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	PTRHD1	Q6GMV3	140 aa	Known RBP	10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	KIAA0930	Q6ICG6	404 aa	Predicted RBP	10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	SYDE1	Q6ZW31	735 aa	Predicted RBP	10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	PRSS42	Q7Z5A4	293 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	PCGF5	Q86SE9	256 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	PDZD3	Q86UT5	571 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	LRRC6	Q86X45	466 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	KLHL7	Q8IXQ5	586 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	BMPER	Q8N8U9	685 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	NAT8L	Q8N9F0	302 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	LCN9	Q8WX39	176 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	TFG	Q92734	400 aa	Predicted RBP	10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	ZPBP	Q9BS86	351 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	CARD6	Q9BX69	1037 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	ZNF768	Q9H5H4	540 aa	Known RBP	10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	MVB12B	Q9H7P6	319 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	FBXO8	Q9NRD0	319 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	KCND1	Q9NSA2	647 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	RNF14	Q9UBS8	474 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	GNPTG	Q9UJJ9	305 aa		10.8	□□□□□ -0.68
GGA1-222	ENST00000489772	FAM237B	A0A1B0GVD1	139 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	SLC5A10	A0PJK1	596 aa		10.79	□□□□□ -0.68
GGA1-222	ENST00000489772	OR6C74	A6NCV1	312 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms