RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 DDA1Q9BW61 102 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 RAB33BQ9H082 229 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 DDX47Q9H0S4 455 aaKnown RBP13.94□□□□□ -0.18
BRCA1-218ENST00000489037 KIR3DX1Q9H7L2 352 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 MVB12BQ9H7P6 319 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 OCIAD1Q9NX40 245 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 OGFRQ9NZT2 677 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 EPHA6Q9UF33 1036 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 SLC24A2Q9UI40 661 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 GNPTGQ9UJJ9 305 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 ACSL6Q9UKU0 697 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 PTPRQQ9UMZ3 2332 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 NEU2Q9Y3R4 380 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 PRSS21Q9Y6M0 314 aa13.94□□□□□ -0.18
BRCA1-218ENST00000489037 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.94□□□□□ -0.18
BRCA1-218ENST00000489037 FAM208BQ5VWN6 2430 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 FREM2Q5SZK8 3169 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 GOLGA8MH3BSY2 632 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 CCDC188H7C350 402 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 PRMT5O14744 637 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-218ENST00000489037 KDM1AO60341 852 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 OR1I1O60431 355 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 AVILO75366 819 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 ANKRD34CP0C6C1 535 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 LIPCP11150 499 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 PREPP48147 710 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 ARL4DP49703 201 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 GFERP55789 205 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 TMPRSS3P57727 454 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 MC2RQ01718 297 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 BRD3Q15059 726 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 TMED2Q15363 201 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 KCTD19Q17RG1 926 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-218ENST00000489037 RNF187Q5TA31 235 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-218ENST00000489037 ANKRD22Q5VYY1 191 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 CES3Q6UWW8 571 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 CEACAM20Q6UY09 585 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 FAM92BQ6ZTR7 304 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 SYDE1Q6ZW31 735 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-218ENST00000489037 PDZD3Q86UT5 571 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 LRRC6Q86X45 466 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 KLHL7Q8IXQ5 586 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 ACVR1CQ8NER5 493 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 GSDMBQ8TAX9 411 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 TFGQ92734 400 aaPredicted RBP13.93□□□□□ -0.18
BRCA1-218ENST00000489037 MFSD3Q96ES6 412 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 SERPINB12Q96P63 405 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 PANX3Q96QZ0 392 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 ZPBPQ9BS86 351 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 CARD6Q9BX69 1037 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 OR52A5Q9H2C5 316 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 HRASLS2Q9NWW9 162 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 PCYOX1Q9UHG3 505 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 PCDHGA3Q9Y5H0 932 aa13.93□□□□□ -0.18
BRCA1-218ENST00000489037 SDK2Q58EX2 2172 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 FAM237BA0A1B0GVD1 139 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 UBA6A0AVT1 1052 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-218ENST00000489037 C9orf172C9J069 976 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 STMND1H3BQB6 276 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 KPNA5O15131 536 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 TMEM63AO94886 807 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 APOA4P06727 396 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 ITGB6P18564 788 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 PDHA2P29803 388 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 CASQ1P31415 396 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 LEPRP48357 1165 aaKnown RBP13.92□□□□□ -0.18
BRCA1-218ENST00000489037 SEPHS1P49903 392 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 TLE3Q04726 772 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 THOC5Q13769 683 aaKnown RBP13.92□□□□□ -0.18
BRCA1-218ENST00000489037 PTK6Q13882 451 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 DHX34Q14147 1143 aaKnown RBP13.92□□□□□ -0.18
BRCA1-218ENST00000489037 SEMA3AQ14563 771 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 DNTTIP2Q5QJE6 756 aaKnown RBP13.92□□□□□ -0.18
BRCA1-218ENST00000489037 KIAA0930Q6ICG6 404 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-218ENST00000489037 PRSS42Q7Z5A4 293 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 LDB1Q86U70 411 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-218ENST00000489037 CAND1Q86VP6 1230 aaKnown RBP13.92□□□□□ -0.18
BRCA1-218ENST00000489037 CREG2Q8IUH2 290 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 NAT8LQ8N9F0 302 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 PHC3Q8NDX5 983 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 OR4E2Q8NGC2 313 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 ASZ1Q8WWH4 475 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 LCN9Q8WX39 176 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 JPH3Q8WXH2 748 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-218ENST00000489037 UBXN4Q92575 508 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 SLCO2A1Q92959 643 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 ZNF669Q96BR6 464 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-218ENST00000489037 TCF12Q99081 682 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 CD180Q99467 661 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 SRMSQ9H3Y6 488 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 ZNF768Q9H5H4 540 aaKnown RBP13.92□□□□□ -0.18
BRCA1-218ENST00000489037 FBXO8Q9NRD0 319 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 MARCH4Q9P2E8 410 aaPredicted RBP13.92□□□□□ -0.18
BRCA1-218ENST00000489037 ASF1AQ9Y294 204 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 VPS9D1Q9Y2B5 631 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 MAD1L1Q9Y6D9 718 aa13.92□□□□□ -0.18
BRCA1-218ENST00000489037 OR6C74A6NCV1 312 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 OR5K3A6NET4 321 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 MATN2O00339 956 aa13.91□□□□□ -0.18
BRCA1-218ENST00000489037 DNALI1O14645 258 aaPredicted RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms