RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 PRKAA1Q13131 559 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 GSE1Q14687 1217 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 IZUMO3Q5VZ72 239 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 CAPRIN2Q6IMN6 1127 aaKnown RBP17.93■□□□□ 0.46
HDAC6-231ENST00000488905 FBXO38Q6PIJ6 1188 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 RANBP10Q6VN20 620 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 LILRA3Q8N6C8 439 aaPredicted RBP17.93■□□□□ 0.46
HDAC6-231ENST00000488905 SLC38A9Q8NBW4 561 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 OR13C4Q8NGS5 318 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 ULK4Q96C45 1275 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 DCUN1D1Q96GG9 259 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 LRFN5Q96NI6 719 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 APOL2Q9BQE5 337 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 FERMT1Q9BQL6 677 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 FANCEQ9HB96 536 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 FARSAQ9Y285 508 aaKnown RBP17.93■□□□□ 0.46
HDAC6-231ENST00000488905 PCDHGA9Q9Y5G4 932 aaKnown RBP17.93■□□□□ 0.46
HDAC6-231ENST00000488905 HEBP2Q9Y5Z4 205 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 COLEC10Q9Y6Z7 277 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 TEX15Q9BXT5 2789 aa17.93■□□□□ 0.46
HDAC6-231ENST00000488905 HIVEP3Q5T1R4 2406 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 MACROD2A1Z1Q3 448 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 ARGFXA6NJG6 315 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 AGAP14A8MT82 685 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 POLR2CP19387 275 aaPredicted RBP17.92■□□□□ 0.46
HDAC6-231ENST00000488905 ZNF140P52738 457 aaPredicted RBP17.92■□□□□ 0.46
HDAC6-231ENST00000488905 GSDMDP57764 484 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 ABRQ12979 859 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 TBX2Q13207 712 aaPredicted RBP17.92■□□□□ 0.46
HDAC6-231ENST00000488905 KRT33BQ14525 404 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 CCDC181Q5TID7 509 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 CFAP206Q8IYR0 622 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 NXPE1Q8N323 547 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 ACVR1CQ8NER5 493 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 CPT1BQ92523 772 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 CCM2Q9BSQ5 444 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 SLC25A23Q9BV35 468 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 CHST8Q9H2A9 424 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 ACSS2Q9NR19 701 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 TFR2Q9UP52 801 aa17.92■□□□□ 0.46
HDAC6-231ENST00000488905 AAR2Q9Y312 384 aaKnown RBP17.92■□□□□ 0.46
HDAC6-231ENST00000488905 MATN2O00339 956 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 PJA2O43164 708 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 LCA5LO95447 670 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 CRTAMO95727 393 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 POLBP06746 335 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 KLK3P07288 261 aaPredicted RBP17.91■□□□□ 0.46
HDAC6-231ENST00000488905 ITGALP20701 1170 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 CDH3P22223 829 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 PTGIRP43119 386 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 OTUD4Q01804 1114 aaKnown RBP17.91■□□□□ 0.46
HDAC6-231ENST00000488905 ANKRD20A2Q5SQ80 823 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 ANKRD20A1Q5TYW2 823 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 ANKRD20A3Q5VUR7 823 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 SNX20Q7Z614 316 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 CDKL3Q8IVW4 592 aaPredicted RBP17.91■□□□□ 0.46
HDAC6-231ENST00000488905 DSELQ8IZU8 1212 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 OR4E2Q8NGC2 313 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 ACTL9Q8TC94 416 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 ADAMTS17Q8TE56 1095 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 COPS8Q99627 209 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 ING2Q9H160 280 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 TSPY26PQ9H489 355 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 MLXIPLQ9NP71 852 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 C1GALT1Q9NS00 363 aa17.91■□□□□ 0.46
HDAC6-231ENST00000488905 GSAPA4D1B5 854 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 SLC9B1P1A6NJY1 282 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 TTLL8A6PVC2 850 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 TMEM150CB9EJG8 249 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 CFAP99D6REC4 459 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 MEN1O00255 615 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 DDX3YO15523 660 aaKnown RBP17.9■□□□□ 0.46
HDAC6-231ENST00000488905 STK10O94804 968 aaKnown RBP17.9■□□□□ 0.46
HDAC6-231ENST00000488905 RAB40ALP0C0E4 278 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 MSL3P1P0C860 447 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 CTNNA1P35221 906 aaKnown RBP17.9■□□□□ 0.46
HDAC6-231ENST00000488905 RORAP35398 523 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 UQCRFS1P47985 274 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 COPS2P61201 443 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 TMPRSS15P98073 1019 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 MSLNQ13421 630 aaPredicted RBP17.9■□□□□ 0.46
HDAC6-231ENST00000488905 PRPSAP1Q14558 356 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 PRAMEF17Q5VTA0 474 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 PAPD7Q5XG87 772 aaKnown RBP17.9■□□□□ 0.46
HDAC6-231ENST00000488905 EFCAB3Q8N7B9 438 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 ENDOVQ8N8Q3 282 aaKnown RBP17.9■□□□□ 0.46
HDAC6-231ENST00000488905 TC2NQ8N9U0 490 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 RNF214Q8ND24 703 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 CPT1CQ8TCG5 803 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 LCN9Q8WX39 176 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 PSMG3-AS1Q96PY0 264 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 C19orf43Q9BQ61 176 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 SRMSQ9H3Y6 488 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 COG4Q9H9E3 785 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 SNX7Q9UNH6 387 aa17.9■□□□□ 0.46
HDAC6-231ENST00000488905 ANKRD12Q6UB98 2062 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 NUP210LQ5VU65 1888 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 PCSK5Q92824 1860 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 C17orf113A0A1B0GUU1 675 aa17.89■□□□□ 0.45
HDAC6-231ENST00000488905 BLACEA4D250 179 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms