RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 PLD3Q8IV08 490 aa14□□□□□ -0.17
RER1-207ENST00000488353 CCDC103Q8IW40 242 aa14□□□□□ -0.17
RER1-207ENST00000488353 SVOPLQ8N434 492 aa14□□□□□ -0.17
RER1-207ENST00000488353 RYBPQ8N488 228 aaPredicted RBP14□□□□□ -0.17
RER1-207ENST00000488353 ATL1Q8WXF7 558 aa14□□□□□ -0.17
RER1-207ENST00000488353 KLHL5Q96PQ7 755 aa14□□□□□ -0.17
RER1-207ENST00000488353 CDK5RAP1Q96SZ6 601 aaKnown RBP14□□□□□ -0.17
RER1-207ENST00000488353 MMP27Q9H306 513 aa14□□□□□ -0.17
RER1-207ENST00000488353 SLAMF8Q9P0V8 285 aa14□□□□□ -0.17
RER1-207ENST00000488353 DNAJB9Q9UBS3 223 aa14□□□□□ -0.17
RER1-207ENST00000488353 POLG2Q9UHN1 485 aa14□□□□□ -0.17
RER1-207ENST00000488353 SLC4A1P02730 911 aa14□□□□□ -0.17
RER1-207ENST00000488353 IL12AP29459 219 aa14□□□□□ -0.17
RER1-207ENST00000488353 CD86P42081 329 aa14□□□□□ -0.17
RER1-207ENST00000488353 CHRNEQ04844 493 aa14□□□□□ -0.17
RER1-207ENST00000488353 ZNF33AQ06730 810 aa14□□□□□ -0.17
RER1-207ENST00000488353 TUSC3Q13454 348 aa14□□□□□ -0.17
RER1-207ENST00000488353 IL18R1Q13478 541 aa14□□□□□ -0.17
RER1-207ENST00000488353 HECTD2Q5U5R9 776 aa14□□□□□ -0.17
RER1-207ENST00000488353 DESI1Q6ICB0 168 aa14□□□□□ -0.17
RER1-207ENST00000488353 OVOS1Q6IE37 1185 aa14□□□□□ -0.17
RER1-207ENST00000488353 SPATA19Q7Z5L4 167 aa14□□□□□ -0.17
RER1-207ENST00000488353 PIM3Q86V86 326 aa14□□□□□ -0.17
RER1-207ENST00000488353 MCOLN3Q8TDD5 553 aa14□□□□□ -0.17
RER1-207ENST00000488353 SNX18Q96RF0 628 aa14□□□□□ -0.17
RER1-207ENST00000488353 ACBD6Q9BR61 282 aa14□□□□□ -0.17
RER1-207ENST00000488353 SMOC2Q9H3U7 446 aa14□□□□□ -0.17
RER1-207ENST00000488353 TUBB1Q9H4B7 451 aa14□□□□□ -0.17
RER1-207ENST00000488353 COMMD8Q9NX08 183 aa14□□□□□ -0.17
RER1-207ENST00000488353 OSGIN1Q9UJX0 560 aa14□□□□□ -0.17
RER1-207ENST00000488353 CRYL1Q9Y2S2 319 aa14□□□□□ -0.17
RER1-207ENST00000488353 C1RP00736 705 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 CYBBP04839 570 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 ANXA6P08133 673 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 LINC00032P0C843 101 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 CCR1P32246 355 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 SLC26A3P40879 764 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 CDKN2DP55273 166 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 FOXA1P55317 472 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 CDK5R2Q13319 367 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 TRIM71Q2Q1W2 868 aaKnown RBP13.99□□□□□ -0.17
RER1-207ENST00000488353 UBE2UQ5VVX9 321 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 FAM171BQ6P995 826 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 TMEM207Q6UWW9 146 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 PRR23CQ6ZRP0 262 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 ZNF280BQ86YH2 543 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 HID1Q8IV36 788 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 ASCC1Q8N9N2 400 aaKnown RBP13.99□□□□□ -0.17
RER1-207ENST00000488353 PROX1Q92786 737 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 CLIP3Q96DZ5 547 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 UGT2B28Q9BY64 529 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 EPS8L2Q9H6S3 715 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 INTS7Q9NVH2 962 aaKnown RBP13.99□□□□□ -0.17
RER1-207ENST00000488353 KCTD3Q9Y597 815 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 E9PAM4 449 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 J3KR12 359 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 XPNPEP2O43895 674 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 ALX3O95076 343 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 CST1P01037 141 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 IGLV3-25P01717 112 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 MRPL19P49406 292 aaKnown RBP13.99□□□□□ -0.17
RER1-207ENST00000488353 NKX3-2P78367 333 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 CLCA4Q14CN2 919 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 RAB44Q7Z6P3 723 aaPredicted RBP13.99□□□□□ -0.17
RER1-207ENST00000488353 PEX5LQ8IYB4 626 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 DTWD1Q8N5C7 304 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 OR52K2Q8NGK3 314 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 PABPC5Q96DU9 382 aaKnown RBP13.99□□□□□ -0.17
RER1-207ENST00000488353 ZHX1-C8orf76Q96EF9 292 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 TEX37Q96LM6 180 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 ARPC5LQ9BPX5 153 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 ZNF221Q9UK13 617 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 ANGPTL3Q9Y5C1 460 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 N6AMT1Q9Y5N5 214 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 HS3ST4Q9Y661 456 aa13.99□□□□□ -0.17
RER1-207ENST00000488353 PPP6CO00743 305 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 GNGT2O14610 69 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 SNX2O60749 519 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 SLC22A3O75751 556 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 ANGPTL1O95841 491 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 CES1P23141 567 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 FSHRP23945 695 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 PSMB9P28065 219 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 GRIK1P39086 918 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 SERPINH1P50454 418 aaKnown RBP13.98□□□□□ -0.17
RER1-207ENST00000488353 ARSDP51689 593 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 POLR2JP52435 117 aaKnown RBP13.98□□□□□ -0.17
RER1-207ENST00000488353 ACLYP53396 1101 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 IST1P53990 364 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 TUBA1BP68363 451 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 DSC2Q02487 901 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 DGCR6Q14129 220 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 PLEKHG6Q3KR16 790 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 CCBE1Q6UXH8 406 aaPredicted RBP13.98□□□□□ -0.17
RER1-207ENST00000488353 TUBA1AQ71U36 451 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 RTN4RL1Q86UN2 441 aaPredicted RBP13.98□□□□□ -0.17
RER1-207ENST00000488353 RALGPS2Q86X27 583 aaPredicted RBP13.98□□□□□ -0.17
RER1-207ENST00000488353 KIAA1958Q8N8K9 716 aa13.98□□□□□ -0.17
RER1-207ENST00000488353 REXO5Q96IC2 774 aaKnown RBP13.98□□□□□ -0.17
RER1-207ENST00000488353 PKMYT1Q99640 499 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms