RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 PRG2P13727 222 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 NDUFB7P17568 137 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 GPD1P21695 349 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 ACAT1P24752 427 aaKnown RBP3.5□□□□□ -1.85
HFM1-208ENST00000488023 HOXD9P28356 352 aaPredicted RBP3.5□□□□□ -1.85
HFM1-208ENST00000488023 MDH1P40925 334 aaKnown RBP3.5□□□□□ -1.85
HFM1-208ENST00000488023 ABCG1P45844 678 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 ZNF75DP51815 510 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 TMPRSS3P57727 454 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 ACTR1AP61163 376 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 POLR2LP62875 67 aaKnown RBP3.5□□□□□ -1.85
HFM1-208ENST00000488023 GALK2Q01415 458 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 FOLH1Q04609 750 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 TNK1Q13470 666 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 UGCGQ16739 394 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 RABL6Q3YEC7 729 aaPredicted RBP3.5□□□□□ -1.85
HFM1-208ENST00000488023 TTC39AQ5SRH9 613 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 NSUN5P2Q63ZY6 315 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 TXNRD3NBQ6F5E7 133 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 WDR88Q6ZMY6 472 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 RBM43Q6ZSC3 357 aaKnown RBP3.5□□□□□ -1.85
HFM1-208ENST00000488023 LINGO2Q7L985 606 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 ADAMTSL2Q86TH1 951 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 AQP12AQ8IXF9 295 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 BATF2Q8N1L9 274 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 RASGEF1CQ8N431 466 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 TBC1D16Q8TBP0 767 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 HM13Q8TCT9 377 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 FAM216AQ8WUB2 273 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 RAD54LQ92698 747 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 ERGIC1Q969X5 290 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 TMEM186Q96B77 213 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 SARAFQ96BY9 339 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 AP2M1Q96CW1 435 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 SPATA33Q96N06 139 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 FCRL5Q96RD9 977 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 CPNE1Q99829 537 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 ZNF577Q9BSK1 485 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 THUMPD2Q9BTF0 503 aaKnown RBP3.5□□□□□ -1.85
HFM1-208ENST00000488023 TM2D2Q9BX73 214 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 SLC29A3Q9BZD2 475 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 ACPTQ9BZG2 426 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 LHPPQ9H008 270 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 CDT1Q9H211 546 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 FN3KQ9H479 309 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 C17orf75Q9HAS0 396 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 PALMDQ9NP74 551 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 MYNNQ9NPC7 610 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 PNPLA3Q9NST1 481 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 FAM212BQ9NTI7 297 aaPredicted RBP3.5□□□□□ -1.85
HFM1-208ENST00000488023 ASB6Q9NWX5 421 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 GAR1Q9NY12 217 aaKnown RBP3.5□□□□□ -1.85
HFM1-208ENST00000488023 CISD1Q9NZ45 108 aaKnown RBP3.5□□□□□ -1.85
HFM1-208ENST00000488023 EXTL2Q9UBQ6 330 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 OR14J1Q9UGF5 321 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 ST3GAL5Q9UNP4 418 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 B3GALT5Q9Y2C3 310 aa3.5□□□□□ -1.85
HFM1-208ENST00000488023 C2orf92A0A1B0GVN3 265 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 TCRBV5S1A1TA0A578 114 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 FAM90A10PA6NDY2 464 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 H0YIG0 161 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 TLR4O00206 839 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 CLDN4O14493 209 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 SOCS6O14544 535 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 MAP2K7O14733 419 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 PPIP5K2O43314 1243 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 FCGR3BO75015 233 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 SERPING1P05155 500 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 PLA2G4BP0C869 781 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 AREGP15514 252 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 ARF4P18085 180 aaPredicted RBP3.49□□□□□ -1.85
HFM1-208ENST00000488023 ADSSP30520 456 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 EIF2S3P41091 472 aaKnown RBP3.49□□□□□ -1.85
HFM1-208ENST00000488023 MAGEB1P43366 347 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 PFKFB3Q16875 520 aaPredicted RBP3.49□□□□□ -1.85
HFM1-208ENST00000488023 CDO1Q16878 200 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 EPC2Q52LR7 807 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 PLEKHO1Q53GL0 409 aaPredicted RBP3.49□□□□□ -1.85
HFM1-208ENST00000488023 ZNF789Q5FWF6 425 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 PLAC9Q5JTB6 97 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 LRRC73Q5JTD7 316 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 ALS2CLQ60I27 953 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 NEK5Q6P3R8 708 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 CYB5D1Q6P9G0 228 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 CCBE1Q6UXH8 406 aaPredicted RBP3.49□□□□□ -1.85
HFM1-208ENST00000488023 MEPCEQ7L2J0 689 aaKnown RBP3.49□□□□□ -1.85
HFM1-208ENST00000488023 PTF1AQ7RTS3 328 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 PRSS42Q7Z5A4 293 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 FOXP4Q8IVH2 680 aaPredicted RBP3.49□□□□□ -1.85
HFM1-208ENST00000488023 L3MBTL4Q8NA19 623 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 MCPH1Q8NEM0 835 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 AGBL3Q8NEM8 1001 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 OR1J2Q8NGS2 313 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 SNRNP40Q96DI7 357 aaKnown RBP3.49□□□□□ -1.85
HFM1-208ENST00000488023 ZNF419Q96HQ0 510 aaPredicted RBP3.49□□□□□ -1.85
HFM1-208ENST00000488023 ZNF570Q96NI8 536 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 FEVQ99581 238 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 CARD6Q9BX69 1037 aa3.49□□□□□ -1.85
HFM1-208ENST00000488023 LSG1Q9H089 658 aaKnown RBP3.49□□□□□ -1.85
HFM1-208ENST00000488023 CD93Q9NPY3 652 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms