RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 FTCDO95954 541 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 NTRK1P04629 796 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 POLR2CP19387 275 aaPredicted RBP12.13□□□□□ -0.47
SREBF1-215ENST00000487401 ARCN1P48444 511 aaKnown RBP12.13□□□□□ -0.47
SREBF1-215ENST00000487401 PRLHRP49683 370 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 TUBB4BP68371 445 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 DNASE1L3Q13609 305 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 TUBB2AQ13885 445 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 P3H1Q32P28 736 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 CERS6Q6ZMG9 384 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 SERPINA9Q86WD7 417 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 KLHDC8BQ8IXV7 354 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 CARFQ8N187 725 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 LILRA3Q8N6C8 439 aaPredicted RBP12.13□□□□□ -0.47
SREBF1-215ENST00000487401 ACVR1CQ8NER5 493 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 OR8K5Q8NH50 307 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 CT55Q8WUE5 264 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 LCN9Q8WX39 176 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 ABHD17AQ96GS6 310 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 TUBB2BQ9BVA1 445 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 SRMSQ9H3Y6 488 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 KCND1Q9NSA2 647 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 NLE1Q9NVX2 485 aaPredicted RBP12.13□□□□□ -0.47
SREBF1-215ENST00000487401 PACSIN2Q9UNF0 486 aaPredicted RBP12.13□□□□□ -0.47
SREBF1-215ENST00000487401 POLHQ9Y253 713 aa12.13□□□□□ -0.47
SREBF1-215ENST00000487401 TENM4Q6N022 2769 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 GSAPA4D1B5 854 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 DDX3YO15523 660 aaKnown RBP12.12□□□□□ -0.47
SREBF1-215ENST00000487401 CREG1O75629 220 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 METTL18O95568 372 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 GAS8O95995 478 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 CDH3P22223 829 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 ACRV1P26436 265 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 CDKN1CP49918 316 aaPredicted RBP12.12□□□□□ -0.47
SREBF1-215ENST00000487401 KPNA2P52292 529 aaKnown RBP12.12□□□□□ -0.47
SREBF1-215ENST00000487401 RPS15P62841 145 aaKnown RBP12.12□□□□□ -0.47
SREBF1-215ENST00000487401 TLE1Q04724 770 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 CACNG1Q06432 222 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 POU6F1Q14863 301 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 SKIDA1Q1XH10 827 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 LACTB2Q53H82 288 aaPredicted RBP12.12□□□□□ -0.47
SREBF1-215ENST00000487401 KCTD11Q693B1 232 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 TMEM126BQ8IUX1 230 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 TAB3Q8N5C8 712 aaPredicted RBP12.12□□□□□ -0.47
SREBF1-215ENST00000487401 STYXQ8WUJ0 223 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 DESI2Q9BSY9 194 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 TMEM121Q9BTD3 319 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 GPR87Q9BY21 358 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 COG4Q9H9E3 785 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 FANCEQ9HB96 536 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 SMARCAL1Q9NZC9 954 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 R3HDM2Q9Y2K5 976 aaKnown RBP12.12□□□□□ -0.47
SREBF1-215ENST00000487401 PCDHGA6Q9Y5G7 932 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 KCNMB2Q9Y691 235 aa12.12□□□□□ -0.47
SREBF1-215ENST00000487401 ARHGEF17Q96PE2 2063 aaPredicted RBP12.12□□□□□ -0.47
SREBF1-215ENST00000487401 FLNBO75369 2602 aaKnown RBP12.11□□□□□ -0.47
SREBF1-215ENST00000487401 IGLV3-16A0A075B6K0 115 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 SLC9B1P1A6NJY1 282 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 MKRN2OSH3BPM6 223 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 H7C0S8 307 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 MATN2O00339 956 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 CPNE3O75131 537 aaKnown RBP12.11□□□□□ -0.47
SREBF1-215ENST00000487401 SCRG1O75711 98 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 AP2A2O94973 939 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 AP2A1O95782 977 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 RECKO95980 971 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 GSTM1P09488 218 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 CD151P48509 253 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 LMAN1P49257 510 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 GSTM4Q03013 218 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 RPA4Q13156 261 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 GPR19Q15760 415 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 FBXO38Q6PIJ6 1188 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 LINC00523Q86TU6 105 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 DNAAF3Q8N9W5 541 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 PHC3Q8NDX5 983 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 SLC35B2Q8TB61 432 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 SEC14L1Q92503 715 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 MR1Q95460 341 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 CDKN2AIPNLQ96HQ2 116 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 ACTL8Q9H568 366 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 MVB12BQ9H7P6 319 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 C1GALT1Q9NS00 363 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 PIH1D1Q9NWS0 290 aaKnown RBP12.11□□□□□ -0.47
SREBF1-215ENST00000487401 IMPACTQ9P2X3 320 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 ANAPC2Q9UJX6 822 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 MAN2B2Q9Y2E5 1009 aa12.11□□□□□ -0.47
SREBF1-215ENST00000487401 TRBV5-4A0A0C4DH59 114 aa12.1□□□□□ -0.47
SREBF1-215ENST00000487401 TCRBV7S2A1N4TA0A589 114 aa12.1□□□□□ -0.47
SREBF1-215ENST00000487401 KLK3P07288 261 aaPredicted RBP12.1□□□□□ -0.47
SREBF1-215ENST00000487401 FURINP09958 794 aa12.1□□□□□ -0.47
SREBF1-215ENST00000487401 PRSS56P0CW18 603 aa12.1□□□□□ -0.47
SREBF1-215ENST00000487401 PTPN4P29074 926 aa12.1□□□□□ -0.47
SREBF1-215ENST00000487401 STIP1P31948 543 aaKnown RBP12.1□□□□□ -0.47
SREBF1-215ENST00000487401 CASRP41180 1078 aa12.1□□□□□ -0.47
SREBF1-215ENST00000487401 PREPP48147 710 aa12.1□□□□□ -0.47
SREBF1-215ENST00000487401 GDF10P55107 478 aa12.1□□□□□ -0.47
SREBF1-215ENST00000487401 PRKG2Q13237 762 aa12.1□□□□□ -0.47
SREBF1-215ENST00000487401 KLF1Q13351 362 aaPredicted RBP12.1□□□□□ -0.47
SREBF1-215ENST00000487401 LAMB3Q13751 1172 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms