RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 UNKQ9C0B0 810 aaKnown RBP14.9□□□□□ -0.02
MCF2L-228ENST00000487354 C1GALT1Q9NS00 363 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 IGSF5Q9NSI5 407 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 HEY1Q9Y5J3 304 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 CNTRLQ7Z7A1 2325 aa14.9□□□□□ -0.02
MCF2L-228ENST00000487354 HIVEP1P15822 2718 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 MGAT4DA6NG13 374 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 BTN3A3O00478 584 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 BUD23O43709 281 aaKnown RBP14.89□□□□□ -0.03
MCF2L-228ENST00000487354 KRT38O76015 456 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 PVRP15151 417 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 CDH3P22223 829 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 PTPN3P26045 913 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 GRNP28799 593 aaKnown RBP14.89□□□□□ -0.03
MCF2L-228ENST00000487354 PTPRCAPQ14761 206 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 LLGL1Q15334 1064 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 KYNUQ16719 465 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 ANO6Q4KMQ2 910 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 FIGNQ5HY92 759 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 SIRPB2Q5JXA9 342 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 FNBP1LQ5T0N5 605 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 SASS6Q6UVJ0 657 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 CDHR3Q6ZTQ4 885 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 DET1Q7L5Y6 550 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 PPP1R32Q7Z5V6 425 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 DAAM2Q86T65 1068 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 MAP7D3Q8IWC1 876 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 OR4E2Q8NGC2 313 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 OR2L2Q8NH16 312 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 ZNF830Q96NB3 372 aaPredicted RBP14.89□□□□□ -0.03
MCF2L-228ENST00000487354 TTC25Q96NG3 672 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 ZCCHC2Q9C0B9 1178 aaKnown RBP14.89□□□□□ -0.03
MCF2L-228ENST00000487354 ILKAPQ9H0C8 392 aaPredicted RBP14.89□□□□□ -0.03
MCF2L-228ENST00000487354 FANCEQ9HB96 536 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 ENTPD4Q9Y227 616 aa14.89□□□□□ -0.03
MCF2L-228ENST00000487354 COPG1Q9Y678 874 aaKnown RBP14.89□□□□□ -0.03
MCF2L-228ENST00000487354 GLYATL1P3A0A0U1RQE8 302 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 ARHGAP10A1A4S6 786 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 ZNF487B1APH4 448 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 BTN3A1O00481 513 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 ZNF749O43361 778 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 CTSBP07858 339 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 CBSLP0DN79 551 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 CYP2A7P20853 494 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 PRDX3P30048 256 aaKnown RBP14.88□□□□□ -0.03
MCF2L-228ENST00000487354 CBSP35520 551 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 HADHAP40939 763 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 PREPP48147 710 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 GABRA4P48169 554 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 RIPPLY3P57055 190 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 SOX8P57073 446 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 ZRSR2Q15696 482 aaKnown RBP14.88□□□□□ -0.03
MCF2L-228ENST00000487354 ZNF658BQ4V348 819 aaPredicted RBP14.88□□□□□ -0.03
MCF2L-228ENST00000487354 TEX44Q53QW1 395 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 ARMC6Q6NXE6 501 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 KCNMB4Q86W47 210 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 MRGPRX2Q96LB1 330 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 LINC00615Q96LM1 132 aaPredicted RBP14.88□□□□□ -0.03
MCF2L-228ENST00000487354 TEKT5Q96M29 485 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 TRAPPC9Q96Q05 1148 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 PHF12Q96QT6 1004 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 SRPK1Q96SB4 655 aaKnown RBP14.88□□□□□ -0.03
MCF2L-228ENST00000487354 DPH2Q9BQC3 489 aaPredicted RBP14.88□□□□□ -0.03
MCF2L-228ENST00000487354 DHRS4Q9BTZ2 278 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 PACSIN1Q9BY11 444 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 KLHL25Q9H0H3 589 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 TRABDQ9H4I3 376 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 SYTL2Q9HCH5 934 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 FAM8A1Q9UBU6 413 aa14.88□□□□□ -0.03
MCF2L-228ENST00000487354 A0A0A6YYK5 440 aaPredicted RBP14.87□□□□□ -0.03
MCF2L-228ENST00000487354 LRRTM2O43300 516 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 HNRNPRO43390 633 aaKnown RBP14.87□□□□□ -0.03
MCF2L-228ENST00000487354 UMODP07911 640 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 WNT3AP56704 352 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 WASHC5Q12768 1159 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 SSPNQ14714 243 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 PRKD1Q15139 912 aaPredicted RBP14.87□□□□□ -0.03
MCF2L-228ENST00000487354 PPP2R5EQ16537 467 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 BCL7AQ4VC05 210 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 LYPLAL1Q5VWZ2 237 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 ZDHHC20Q5W0Z9 365 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 ALKBH5Q6P6C2 394 aaKnown RBP14.87□□□□□ -0.03
MCF2L-228ENST00000487354 SYN2Q92777 582 aaPredicted RBP14.87□□□□□ -0.03
MCF2L-228ENST00000487354 OXNAD1Q96HP4 312 aaPredicted RBP14.87□□□□□ -0.03
MCF2L-228ENST00000487354 GBP5Q96PP8 586 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 FAM60AQ9NP50 221 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 P4HTMQ9NXG6 502 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 ACSL5Q9ULC5 683 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 NOVA2Q9UNW9 492 aaKnown RBP14.87□□□□□ -0.03
MCF2L-228ENST00000487354 ZFHX3Q15911 3703 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 TACC2O95359 2948 aa14.87□□□□□ -0.03
MCF2L-228ENST00000487354 GSAPA4D1B5 854 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 LRRD1A4D1F6 860 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 C9J4A7 227 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 E7EQ34 232 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 LDB2O43679 373 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 ZG16O60844 167 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 SLC35G4P0C7Q5 338 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 NFKB1P19838 968 aa14.86□□□□□ -0.03
MCF2L-228ENST00000487354 PBX1P40424 430 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms