RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 SPEGQ15772 3267 aa5.54□□□□□ -1.52
COPS3-208ENST00000486032 TMEM131Q92545 1883 aa5.54□□□□□ -1.52
COPS3-208ENST00000486032 ZNF106Q9H2Y7 1883 aaKnown RBP5.54□□□□□ -1.52
COPS3-208ENST00000486032 TP53BP1Q12888 1972 aaPredicted RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 TRBV5-4A0A0C4DH59 114 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 EXOC1LA0A1B0GW35 172 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 FAM159BA6NKW6 160 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 PDZK1P1A8MUH7 402 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 B4DGG1 531 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 KMOO15229 486 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 DNAJC6O75061 913 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 NIPSNAP2O75323 286 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 SPAG6O75602 509 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 POP7O75817 140 aaKnown RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 CER1O95813 267 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 AHSGP02765 367 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 CSF2P04141 144 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 SHBGP04278 402 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 IVLP07476 585 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 ANXA6P08133 673 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 HOXC4P09017 264 aaPredicted RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 PKMP14618 531 aaKnown RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 PSMA3P25788 255 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 GABRB3P28472 473 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 HSD17B3P37058 310 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 GP5P40197 560 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 CTSKP43235 329 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 MSH2P43246 934 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 SLCO1A2P46721 670 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 CD151P48509 253 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 ARRB1P49407 418 aaPredicted RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 PPM1FP49593 454 aaPredicted RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 CCT8P50990 548 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 BLKP51451 505 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 HK3P52790 923 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 SLC12A2P55011 1212 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 IFFO1Q0D2I5 559 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 OVGP1Q12889 678 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 ILF3Q12906 894 aaKnown RBP eCLIP5.53□□□□□ -1.52
COPS3-208ENST00000486032 BMPR2Q13873 1038 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 NFE2L1Q14494 772 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 TYSND1Q2T9J0 566 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 KLHL38Q2WGJ6 581 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 DEFB133Q30KQ1 61 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 SYTL3Q4VX76 610 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 PYCR3Q53H96 274 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 RBM20Q5T481 1227 aaKnown RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 RNF187Q5TA31 235 aaPredicted RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 PEAR1Q5VY43 1037 aaPredicted RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 ARMC3Q5W041 872 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 EMBQ6PCB8 327 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 SLC23A3Q6PIS1 610 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 IL27RAQ6UWB1 636 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 PACS1Q6VY07 963 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 LMNTD2Q8IXW0 634 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 CFAP206Q8IYR0 622 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 MINDY1Q8N5J2 469 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 LILRA3Q8N6C8 439 aaPredicted RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 EIF1ADQ8N9N8 165 aaKnown RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 C2CD4AQ8NCU7 369 aaPredicted RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 GPR150Q8NGU9 434 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 OR2W6PQ8NHA6 318 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 DTX3LQ8TDB6 740 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 AENQ8WTP8 325 aaKnown RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 NUDT8Q8WV74 236 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 HEXDCQ8WVB3 486 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 SKA2Q8WVK7 121 aaPredicted RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 LPGAT1Q92604 370 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 CAVIN3Q969G5 261 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 CYTH2Q99418 400 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 C19orf43Q9BQ61 176 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 CCDC77Q9BR77 488 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 CCM2Q9BSQ5 444 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 GSDMCQ9BYG8 508 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 DPEP2Q9H4A9 486 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 CAPN10Q9HC96 672 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 INTS10Q9NVR2 710 aaKnown RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 ARGLU1Q9NWB6 273 aaPredicted RBP5.53□□□□□ -1.52
COPS3-208ENST00000486032 UCKL1Q9NWZ5 548 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 MOCS1Q9NZB8 636 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 VPS18Q9P253 973 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 SPASTQ9UBP0 616 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 GULP1Q9UBP9 304 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 SLC23A2Q9UGH3 650 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 TBK1Q9UHD2 729 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 PSMD13Q9UNM6 376 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 SLC17A4Q9Y2C5 497 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 PI4KAP42356 2102 aa5.53□□□□□ -1.52
COPS3-208ENST00000486032 A0A1B0GTQ1 180 aa5.52□□□□□ -1.53
COPS3-208ENST00000486032 FAM95CA0A1B0GW59 222 aa5.52□□□□□ -1.53
COPS3-208ENST00000486032 LNP1A1A4G5 178 aa5.52□□□□□ -1.53
COPS3-208ENST00000486032 MGAT4DA6NG13 374 aa5.52□□□□□ -1.53
COPS3-208ENST00000486032 DBX1A6NMT0 343 aa5.52□□□□□ -1.53
COPS3-208ENST00000486032 AGAP14A8MT82 685 aa5.52□□□□□ -1.53
COPS3-208ENST00000486032 F8W8V4 182 aa5.52□□□□□ -1.53
COPS3-208ENST00000486032 TNFRSF10CO14798 259 aa5.52□□□□□ -1.53
COPS3-208ENST00000486032 CTIFO43310 598 aaKnown RBP5.52□□□□□ -1.53
COPS3-208ENST00000486032 AQP9O43315 295 aa5.52□□□□□ -1.53
COPS3-208ENST00000486032 SGTAO43765 313 aa5.52□□□□□ -1.53
COPS3-208ENST00000486032 VPS26AO75436 327 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms