RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 DEPDC7Q96QD5 511 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 RHOXF2Q9BQY4 288 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 TBC1D10AQ9BXI6 508 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.58□□□□□ -0.56
HPS4-214ENST00000485842 FOXP3Q9BZS1 431 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 CCDC68Q9H2F9 335 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 L2HGDHQ9H9P8 463 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 RDH14Q9HBH5 336 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 ZDHHC18Q9NUE0 388 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 ZFATQ9P243 1243 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 TSR3Q9UJK0 312 aaKnown RBP11.58□□□□□ -0.56
HPS4-214ENST00000485842 ANGPTL2Q9UKU9 493 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 CLCA2Q9UQC9 943 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 PCDHB1Q9Y5F3 818 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 UNC13CQ8NB66 2214 aa11.58□□□□□ -0.56
HPS4-214ENST00000485842 NCOR2Q9Y618 2525 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 IGHV1OR21-1A0A087WYE8 117 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 SLC5A10A0PJK1 596 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 BHMG1C9JSJ3 638 aaPredicted RBP11.57□□□□□ -0.56
HPS4-214ENST00000485842 H3BMM5 538 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 NTN3O00634 580 aaPredicted RBP11.57□□□□□ -0.56
HPS4-214ENST00000485842 DUX1O43812 170 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 CSO75390 466 aaKnown RBP11.57□□□□□ -0.56
HPS4-214ENST00000485842 HAUS5O94927 633 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 CHRM3P20309 590 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 AOAHP28039 575 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 SSTR1P30872 391 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 MGAT5Q09328 741 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 TARDBPQ13148 414 aaKnown RBP eCLIP11.57□□□□□ -0.56
HPS4-214ENST00000485842 RPA4Q13156 261 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 PLCL1Q15111 1095 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 CDCP2Q5VXM1 449 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 CAPRIN2Q6IMN6 1127 aaKnown RBP11.57□□□□□ -0.56
HPS4-214ENST00000485842 USP53Q70EK8 1073 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 OTOAQ7RTW8 1153 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 CNTN4Q8IWV2 1026 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 OR10G6Q8NH81 332 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 SKA2Q8WVK7 121 aaPredicted RBP11.57□□□□□ -0.56
HPS4-214ENST00000485842 NUDT22Q9BRQ3 303 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 PHACTR1Q9C0D0 580 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 SLC40A1Q9NP59 571 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 MTRF1LQ9UGC7 380 aaKnown RBP11.57□□□□□ -0.56
HPS4-214ENST00000485842 WASF3Q9UPY6 502 aa11.57□□□□□ -0.56
HPS4-214ENST00000485842 AGRPO00253 132 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 TCEA3O75764 348 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 PIAS1O75925 651 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 CPNE6O95741 557 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 TYRP1P17643 537 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 CD1CP29017 333 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 CSF2RBP32927 897 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 MAGEA4P43358 317 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 LEPRP48357 1165 aaKnown RBP11.56□□□□□ -0.56
HPS4-214ENST00000485842 CD151P48509 253 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 EPHA4P54764 986 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 ADARP55265 1226 aaKnown RBP11.56□□□□□ -0.56
HPS4-214ENST00000485842 GPLD1P80108 840 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 PLOD1Q02809 727 aaPredicted RBP11.56□□□□□ -0.56
HPS4-214ENST00000485842 CBLBQ13191 982 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 FRG1Q14331 258 aaKnown RBP11.56□□□□□ -0.56
HPS4-214ENST00000485842 TEDDM1Q5T9Z0 273 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 ZNF549Q6P9A3 640 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 KIAA0408Q6ZU52 694 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 B3GNT8Q7Z7M8 397 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 PIM3Q86V86 326 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 VRK3Q8IV63 474 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 RBM12BQ8IXT5 1001 aaKnown RBP11.56□□□□□ -0.56
HPS4-214ENST00000485842 DCBLD1Q8N8Z6 715 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 PHC3Q8NDX5 983 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 ASZ1Q8WWH4 475 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 NCSTNQ92542 709 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 ATXN7L3BQ96GX2 97 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 FERD3LQ96RJ6 166 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 FMO2Q99518 471 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 NDNQ99608 321 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 HGH1Q9BTY7 390 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 FAM129AQ9BZQ8 928 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 UCK1Q9HA47 277 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 ASF1AQ9Y294 204 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 NEUROG3Q9Y4Z2 214 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 HEBP2Q9Y5Z4 205 aa11.56□□□□□ -0.56
HPS4-214ENST00000485842 KPNA5O15131 536 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 VPS26AO75436 327 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 GPC4O75487 556 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 UBXN7O94888 489 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 PROS1P07225 676 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 AMD1P17707 334 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 MPSTP25325 297 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 NDUFS1P28331 727 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 GABRB3P28472 473 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 PDX1P52945 283 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 GPX6P59796 221 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 ABRQ12979 859 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 PRKG2Q13237 762 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 CUL1Q13616 776 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 ISXQ2M1V0 245 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 PLEKHS1Q5SXH7 462 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 RBM20Q5T481 1227 aaKnown RBP11.55□□□□□ -0.56
HPS4-214ENST00000485842 PHF19Q5T6S3 580 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 TMPRSS9Q7Z410 1059 aa11.55□□□□□ -0.56
HPS4-214ENST00000485842 SPNS2Q8IVW8 549 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms