RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 JPH3Q8WXH2 748 aaPredicted RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 CPT1BQ92523 772 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 PPM1MQ96MI6 270 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 SLC46A1Q96NT5 459 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 DPYSL5Q9BPU6 564 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 NUDT22Q9BRQ3 303 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 AP1M1Q9BXS5 423 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 SPRY4Q9C004 299 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 LRRN3Q9H3W5 708 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 FAM96AQ9H5X1 160 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 SLC40A1Q9NP59 571 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 SCN3AQ9NY46 2000 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 GOLGA6AQ9NYA3 693 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 LRIT1Q9P2V4 623 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 EPHA6Q9UF33 1036 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 ZNF148Q9UQR1 794 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 MED16Q9Y2X0 877 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 PKP3Q9Y446 797 aa5.61□□□□□ -1.51
CUX1-208ENST00000485792 PRRC2CQ9Y520 2896 aaKnown RBP5.61□□□□□ -1.51
CUX1-208ENST00000485792 CNTRLQ7Z7A1 2325 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 MN1Q10571 1320 aaPredicted RBP5.6□□□□□ -1.51
CUX1-208ENST00000485792 HEATR9A2RTY3 570 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 CPED1A4D0V7 1026 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 MGAT4DA6NG13 374 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 LILRA5A6NI73 299 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 SRRM3A6NNA2 597 aaPredicted RBP5.6□□□□□ -1.51
CUX1-208ENST00000485792 AP3B1O00203 1094 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 AGRPO00253 132 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 PGRMC1O00264 195 aaKnown RBP5.6□□□□□ -1.51
CUX1-208ENST00000485792 AVILO75366 819 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 CSO75390 466 aaKnown RBP5.6□□□□□ -1.51
CUX1-208ENST00000485792 AP2A2O94973 939 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 CPNE6O95741 557 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 C1QAP02745 245 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 C9P02748 559 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 APRTP07741 180 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 ACP5P13686 325 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 HGFP14210 728 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 JUPP14923 745 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 TCP1P17987 556 aaKnown RBP5.6□□□□□ -1.51
CUX1-208ENST00000485792 ACRV1P26436 265 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 ADH6P28332 368 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 PGGT1BP53609 377 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 LIMK2P53671 638 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 ADARP55265 1226 aaKnown RBP5.6□□□□□ -1.51
CUX1-208ENST00000485792 ERVPABLB-1P60509 514 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 CCL7P80098 99 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 GPLD1P80108 840 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 TMPRSS15P98073 1019 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 TIAL1Q01085 375 aaKnown RBP eCLIP5.6□□□□□ -1.51
CUX1-208ENST00000485792 CACNG1Q06432 222 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 CCDC173Q0VFZ6 552 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 EIF3IQ13347 325 aaKnown RBP5.6□□□□□ -1.51
CUX1-208ENST00000485792 LAMB3Q13751 1172 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 ITIH4Q14624 930 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 POU6F1Q14863 301 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 CLCA4Q14CN2 919 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 C16orf72Q14CZ0 275 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 TRADDQ15628 312 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 TRIP13Q15645 432 aaPredicted RBP5.6□□□□□ -1.51
CUX1-208ENST00000485792 LONRF2Q1L5Z9 754 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 SKIDA1Q1XH10 827 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 HS1BP3Q53T59 392 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 CCDC157Q569K6 752 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 ZNF789Q5FWF6 425 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 PCID2Q5JVF3 399 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 SLC30A9Q6PML9 568 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 TMEM220Q6QAJ8 160 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 NAPRTQ6XQN6 538 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 CHST15Q7LFX5 561 aaPredicted RBP5.6□□□□□ -1.51
CUX1-208ENST00000485792 NLRP9Q7RTR0 991 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 ZNF572Q7Z3I7 529 aaPredicted RBP5.6□□□□□ -1.51
CUX1-208ENST00000485792 SYT9Q86SS6 491 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 LDB1Q86U70 411 aaPredicted RBP5.6□□□□□ -1.51
CUX1-208ENST00000485792 TMEM135Q86UB9 458 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 CCNJLQ8IV13 435 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 IGDCC3Q8IVU1 814 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 SHISA5Q8N114 240 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 PAF1Q8N7H5 531 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 BMPERQ8N8U9 685 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 NAT8LQ8N9F0 302 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 AVL9Q8NBF6 648 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 OR4D9Q8NGE8 314 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 OR2L2Q8NH16 312 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 MAPK15Q8TD08 544 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 TMEM159Q96B96 161 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 ULK4Q96C45 1275 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 SIGLEC10Q96LC7 697 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 RMDN2Q96LZ7 410 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 DEPDC7Q96QD5 511 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 CITED4Q96RK1 184 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 NAP1L3Q99457 506 aaPredicted RBP5.6□□□□□ -1.51
CUX1-208ENST00000485792 RBCK1Q9BYM8 510 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 FOXP3Q9BZS1 431 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 IL22Q9GZX6 179 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 OR52A5Q9H2C5 316 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 SEMA6CQ9H3T2 930 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 DPEP2Q9H4A9 486 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 EPB41L1Q9H4G0 881 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 ASB8Q9H765 288 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms