RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 URB1O60287 2271 aaKnown RBP17.36■□□□□ 0.37
SREBF1-213ENST00000485080 CCDC187A0A096LP49 1063 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 IGHV5-10-1A0A0J9YXX1 117 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 A0A1W2PNU3 283 aaPredicted RBP17.36■□□□□ 0.37
SREBF1-213ENST00000485080 C1QTNF9BB2RNN3 333 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 GOLGA8KD6RF30 607 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 GOLGA8TH3BQL2 631 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 IFRD1O00458 451 aaPredicted RBP17.36■□□□□ 0.37
SREBF1-213ENST00000485080 HGSO14964 777 aaPredicted RBP17.36■□□□□ 0.37
SREBF1-213ENST00000485080 KPNA5O15131 536 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 UBXN7O94888 489 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 SLCO2B1O94956 709 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 S1PR4O95977 384 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 C1QTNF9P0C862 333 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 HOXB3P14651 431 aaPredicted RBP17.36■□□□□ 0.37
SREBF1-213ENST00000485080 AOAHP28039 575 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 ACADLP28330 430 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 PDHA2P29803 388 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 CCR7P32248 378 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 CAV1Q03135 178 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 NKAIN2Q5VXU1 208 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 CNTN4Q8IWV2 1026 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 LSMEM2Q8N112 164 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 OTUD6BQ8N6M0 293 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 WDR36Q8NI36 951 aaKnown RBP17.36■□□□□ 0.37
SREBF1-213ENST00000485080 GABPB2Q8TAK5 448 aaPredicted RBP17.36■□□□□ 0.37
SREBF1-213ENST00000485080 ASZ1Q8WWH4 475 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 ZNF592Q92610 1267 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 WDR83Q9BRX9 315 aaKnown RBP17.36■□□□□ 0.37
SREBF1-213ENST00000485080 TBC1D10AQ9BXI6 508 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 KIR3DX1Q9H7L2 352 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 MVB12BQ9H7P6 319 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 RDH14Q9HBH5 336 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 LATS2Q9NRM7 1088 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 C20orf96Q9NUD7 363 aaPredicted RBP17.36■□□□□ 0.37
SREBF1-213ENST00000485080 IMP3Q9NV31 184 aaKnown RBP17.36■□□□□ 0.37
SREBF1-213ENST00000485080 GRHL1Q9NZI5 618 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 OGFRQ9NZT2 677 aa17.36■□□□□ 0.37
SREBF1-213ENST00000485080 PRAMEF33A0A0G2JMD5 474 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 BHMG1C9JSJ3 638 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-213ENST00000485080 EIF3HO15372 352 aaKnown RBP eCLIP17.35■□□□□ 0.372e-6■□□□□ 9.4
SREBF1-213ENST00000485080 C9P02748 559 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 THRAP10827 490 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 ELK3P41970 407 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 PREPP48147 710 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 MRPS25P82663 173 aaKnown RBP17.35■□□□□ 0.37
SREBF1-213ENST00000485080 CTSL3PQ5NE16 218 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 ZNF470Q6ECI4 717 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 PTRHD1Q6GMV3 140 aaKnown RBP17.35■□□□□ 0.37
SREBF1-213ENST00000485080 KIAA0408Q6ZU52 694 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 GALNT7Q86SF2 657 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 PLXDC1Q8IUK5 500 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 SLC22A15Q8IZD6 547 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 MMGT1Q8N4V1 131 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 PRR11Q96HE9 360 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-213ENST00000485080 FAM167BQ9BTA0 163 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 FOXP3Q9BZS1 431 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 SEMA6CQ9H3T2 930 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 CCDC86Q9H6F5 360 aaKnown RBP17.35■□□□□ 0.37
SREBF1-213ENST00000485080 KLHL42Q9P2K6 505 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 FAM8A1Q9UBU6 413 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 ZC3H7BQ9UGR2 993 aaKnown RBP17.35■□□□□ 0.37
SREBF1-213ENST00000485080 CDYLQ9Y232 598 aa17.35■□□□□ 0.37
SREBF1-213ENST00000485080 MN1Q10571 1320 aaPredicted RBP17.35■□□□□ 0.37
SREBF1-213ENST00000485080 TOX3O15405 576 aaPredicted RBP17.34■□□□□ 0.37
SREBF1-213ENST00000485080 BANF1O75531 89 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 APOA4P06727 396 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 CAPZBP47756 277 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 LEPRP48357 1165 aaKnown RBP17.34■□□□□ 0.37
SREBF1-213ENST00000485080 BOP1Q14137 746 aaKnown RBP17.34■□□□□ 0.37
SREBF1-213ENST00000485080 HSP90AA5PQ58FG0 334 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 PLEKHS1Q5SXH7 462 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 KLHL35Q6PF15 583 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 UNC5AQ6ZN44 842 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 ARHGAP22Q7Z5H3 698 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 KCNMB4Q86W47 210 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 ACVR1CQ8NER5 493 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 LKAAEAR1Q8TD35 194 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 TFGQ92734 400 aaPredicted RBP17.34■□□□□ 0.37
SREBF1-213ENST00000485080 ART4Q93070 314 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 PWWP2AQ96N64 755 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 CNTNAP3BQ96NU0 1288 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 CNTNAP3Q9BZ76 1288 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 B3GNT4Q9C0J1 378 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 IL1RAPL1Q9NZN1 696 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 SLC24A2Q9UI40 661 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 FBXO5Q9UKT4 447 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 CFAP20Q9Y6A4 193 aaKnown RBP17.34■□□□□ 0.37
SREBF1-213ENST00000485080 COMMD10Q9Y6G5 202 aa17.34■□□□□ 0.37
SREBF1-213ENST00000485080 PKD1L2Q7Z442 2459 aa17.33■□□□□ 0.37
SREBF1-213ENST00000485080 ZFHX4Q86UP3 3567 aa17.33■□□□□ 0.37
SREBF1-213ENST00000485080 UBA6A0AVT1 1052 aaPredicted RBP17.33■□□□□ 0.36
SREBF1-213ENST00000485080 IQCF5A8MTL0 148 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 ANKRD34CP0C6C1 535 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 PKMP14618 531 aaKnown RBP17.33■□□□□ 0.36
SREBF1-213ENST00000485080 ATP5DP30049 168 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 SLC1A2P43004 574 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 EIF3BP55884 814 aaKnown RBP17.33■□□□□ 0.36
SREBF1-213ENST00000485080 ERVPABLB-1P60509 514 aa17.33■□□□□ 0.36
SREBF1-213ENST00000485080 GBX1Q14549 363 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms