RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 PCDHGB1Q9Y5G3 927 aa6.4□□□□□ -1.38
UBR3-210ENST00000484596 A0A1W2PP11 408 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 J3QR06 171 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 ZNHIT1O43257 154 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 TADA2AO75478 443 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 TGDSO95455 350 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 FYNP06241 537 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 VPREB1P12018 145 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 FDPSP14324 419 aaKnown RBP6.39□□□□□ -1.39
UBR3-210ENST00000484596 ZNF23P17027 643 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 AMPHP49418 695 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 SIRPAP78324 504 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 POU3F1Q03052 451 aaPredicted RBP6.39□□□□□ -1.39
UBR3-210ENST00000484596 RELQ04864 619 aaPredicted RBP6.39□□□□□ -1.39
UBR3-210ENST00000484596 GTF2H2Q13888 395 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 GTF2H2CQ6P1K8 395 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 SPSB3Q6PJ21 355 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 GFRALQ6UXV0 394 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 TUBA1AQ71U36 451 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 ZNF534Q76KX8 674 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 SATL1Q86VE3 508 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 TMEM219Q86XT9 240 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 ODF3L1Q8IXM7 274 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 TSPAN14Q8NG11 270 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 RDM1Q8NG50 284 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 SLC38A5Q8WUX1 472 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 DEPDC1BQ8WUY9 529 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 TMEM255BQ8WV15 326 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 SECISBP2LQ93073 1101 aaKnown RBP6.39□□□□□ -1.39
UBR3-210ENST00000484596 PCYT2Q99447 389 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 GFI1Q99684 422 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 TUBA1CQ9BQE3 449 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 HGH1Q9BTY7 390 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 KCNK15Q9H427 330 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 XAB2Q9HCS7 855 aaKnown RBP6.39□□□□□ -1.39
UBR3-210ENST00000484596 WBP11Q9Y2W2 641 aaKnown RBP6.39□□□□□ -1.39
UBR3-210ENST00000484596 PCDHGA5Q9Y5G8 931 aa6.39□□□□□ -1.39
UBR3-210ENST00000484596 ZFP37Q9Y6Q3 630 aaPredicted RBP6.39□□□□□ -1.39
UBR3-210ENST00000484596 MAGEB17A8MXT2 336 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 WDR1O75083 606 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 ATP5BP06576 529 aaKnown RBP6.38□□□□□ -1.39
UBR3-210ENST00000484596 FAM106CPP0CH98 169 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 GJA1P17302 382 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 ERCC2P18074 760 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 NR2F2P24468 414 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 COG7P83436 770 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 ZBTB17Q13105 803 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 SNAPC1Q16533 368 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 CAPRIN2Q6IMN6 1127 aaKnown RBP6.38□□□□□ -1.39
UBR3-210ENST00000484596 PET117Q6UWS5 81 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 PRSS57Q6UWY2 283 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 ASB18Q6ZVZ8 466 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 EXOC3L1Q86VI1 746 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 IQCHQ86VS3 1027 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 TMPRSS12Q86WS5 348 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 MUC20Q8N307 709 aaPredicted RBP6.38□□□□□ -1.39
UBR3-210ENST00000484596 TEKT4Q8WW24 435 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 FAM84BQ96KN1 310 aaPredicted RBP6.38□□□□□ -1.39
UBR3-210ENST00000484596 IL17FQ96PD4 163 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 SPAG5Q96R06 1193 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 CITED2Q99967 270 aaPredicted RBP6.38□□□□□ -1.39
UBR3-210ENST00000484596 GPATCH1Q9BRR8 931 aaKnown RBP6.38□□□□□ -1.39
UBR3-210ENST00000484596 HAO2Q9NYQ3 351 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 LARSQ9P2J5 1176 aaKnown RBP6.38□□□□□ -1.39
UBR3-210ENST00000484596 TSPYL4Q9UJ04 414 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 HACL1Q9UJ83 578 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 UHRF1BP1LA0JNW5 1464 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 UGGT2Q9NYU1 1516 aa6.38□□□□□ -1.39
UBR3-210ENST00000484596 KIF27Q86VH2 1401 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 OR5K3A6NET4 321 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 PI4K2BG5E9Z4 385 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 H0YIN7 160 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 TMEM189-UBE2V1I3L0A0 370 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 SLC7A4O43246 635 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 RECQL5O94762 991 aaPredicted RBP6.37□□□□□ -1.39
UBR3-210ENST00000484596 SLU7O95391 586 aaKnown RBP6.37□□□□□ -1.39
UBR3-210ENST00000484596 SNRNP70P08621 437 aaKnown RBP6.37□□□□□ -1.39
UBR3-210ENST00000484596 CDH1P12830 882 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 ATP5DP30049 168 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 CCR10P46092 362 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 RAB28P51157 221 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 MLLT10P55197 1068 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 PPP2R2BQ00005 443 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 RALGDSQ12967 914 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 UBE2V1Q13404 147 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 TNIP1Q15025 636 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 TRAT1Q6PIZ9 186 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 ATG9AQ7Z3C6 839 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 HAUS6Q7Z4H7 955 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 C1orf52Q8N6N3 182 aaKnown RBP6.37□□□□□ -1.39
UBR3-210ENST00000484596 ZNF713Q8N859 430 aaPredicted RBP6.37□□□□□ -1.39
UBR3-210ENST00000484596 ZNF441Q8N8Z8 693 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 SETD6Q8TBK2 473 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 PHF21AQ96BD5 680 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 HDAC11Q96DB2 347 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 SLC25A23Q9BV35 468 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 THUMPD3Q9BV44 507 aaKnown RBP6.37□□□□□ -1.39
UBR3-210ENST00000484596 TAS2R14Q9NYV8 317 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 B3GALT5Q9Y2C3 310 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 OR2W1Q9Y3N9 320 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms