RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 UTP11Q9Y3A2 253 aaKnown RBP15.52■□□□□ 0.08
UPF3A-208ENST00000484246 PTPRBP23467 1997 aa15.52■□□□□ 0.07
UPF3A-208ENST00000484246 ASXL3Q9C0F0 2248 aa15.52■□□□□ 0.07
UPF3A-208ENST00000484246 A0A1W2PNU3 283 aaPredicted RBP15.51■□□□□ 0.07
UPF3A-208ENST00000484246 BHMG1C9JSJ3 638 aaPredicted RBP15.51■□□□□ 0.07
UPF3A-208ENST00000484246 GOLGA8KD6RF30 607 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 GOLGA8TH3BQL2 631 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 IFRD1O00458 451 aaPredicted RBP15.51■□□□□ 0.07
UPF3A-208ENST00000484246 KPNA5O15131 536 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 BANF1O75531 89 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 S1PR4O95977 384 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 C9P02748 559 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 AOAHP28039 575 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 ACADLP28330 430 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 CCR7P32248 378 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 ELK3P41970 407 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 CAV1Q03135 178 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 AMZ1Q400G9 498 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 CTSL3PQ5NE16 218 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 PTRHD1Q6GMV3 140 aaKnown RBP15.51■□□□□ 0.07
UPF3A-208ENST00000484246 ZNF574Q6ZN55 896 aaPredicted RBP15.51■□□□□ 0.07
UPF3A-208ENST00000484246 KIAA0408Q6ZU52 694 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 SLC22A15Q8IZD6 547 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 MMGT1Q8N4V1 131 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 OTUD6BQ8N6M0 293 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 WDR36Q8NI36 951 aaKnown RBP15.51■□□□□ 0.07
UPF3A-208ENST00000484246 LKAAEAR1Q8TD35 194 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 ASZ1Q8WWH4 475 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 ZNF592Q92610 1267 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 PWWP2AQ96N64 755 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 MVB12BQ9H7P6 319 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 POLR1BQ9H9Y6 1135 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 RDH14Q9HBH5 336 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 C20orf96Q9NUD7 363 aaPredicted RBP15.51■□□□□ 0.07
UPF3A-208ENST00000484246 KLHL42Q9P2K6 505 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 FAM8A1Q9UBU6 413 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 CDYLQ9Y232 598 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 COLEC10Q9Y6Z7 277 aa15.51■□□□□ 0.07
UPF3A-208ENST00000484246 ARHGEF17Q96PE2 2063 aaPredicted RBP15.51■□□□□ 0.07
UPF3A-208ENST00000484246 ACACBO00763 2458 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 PRAMEF33A0A0G2JMD5 474 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 IGHV5-10-1A0A0J9YXX1 117 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 UBXN7O94888 489 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 SLCO2B1O94956 709 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 ANKRD34CP0C6C1 535 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 HOXB3P14651 431 aaPredicted RBP15.5■□□□□ 0.07
UPF3A-208ENST00000484246 PDHA2P29803 388 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 ATP5DP30049 168 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 SLC1A2P43004 574 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 PREPP48147 710 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 MRPS25P82663 173 aaKnown RBP15.5■□□□□ 0.07
UPF3A-208ENST00000484246 BOP1Q14137 746 aaKnown RBP15.5■□□□□ 0.07
UPF3A-208ENST00000484246 GBX1Q14549 363 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 TMED2Q15363 201 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 SYTL3Q4VX76 610 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 NKAIN2Q5VXU1 208 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 C8orf74Q6P047 294 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 UNC5AQ6ZN44 842 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 USP53Q70EK8 1073 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 KCNMB4Q86W47 210 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 PLXDC1Q8IUK5 500 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 LSMEM2Q8N112 164 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 C2CD4AQ8NCU7 369 aaPredicted RBP15.5■□□□□ 0.07
UPF3A-208ENST00000484246 GABPB2Q8TAK5 448 aaPredicted RBP15.5■□□□□ 0.07
UPF3A-208ENST00000484246 ART4Q93070 314 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 CERS2Q96G23 380 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 PRR11Q96HE9 360 aaPredicted RBP15.5■□□□□ 0.07
UPF3A-208ENST00000484246 AHCYL2Q96HN2 611 aaKnown RBP15.5■□□□□ 0.07
UPF3A-208ENST00000484246 FOXP3Q9BZS1 431 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 DPH5Q9H2P9 285 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 SEMA6CQ9H3T2 930 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 CCDC86Q9H6F5 360 aaKnown RBP15.5■□□□□ 0.07
UPF3A-208ENST00000484246 LATS2Q9NRM7 1088 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 IL1RAPL1Q9NZN1 696 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 ZC3H7BQ9UGR2 993 aaKnown RBP15.5■□□□□ 0.07
UPF3A-208ENST00000484246 SLC24A2Q9UI40 661 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 FBXO5Q9UKT4 447 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 CHMP2BQ9UQN3 213 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 COMMD10Q9Y6G5 202 aa15.5■□□□□ 0.07
UPF3A-208ENST00000484246 KMT2BQ9UMN6 2715 aaPredicted RBP15.49■□□□□ 0.07
UPF3A-208ENST00000484246 UBA6A0AVT1 1052 aaPredicted RBP15.49■□□□□ 0.07
UPF3A-208ENST00000484246 IQCF5A8MTL0 148 aa15.49■□□□□ 0.07
UPF3A-208ENST00000484246 PLD2O14939 933 aa15.49■□□□□ 0.07
UPF3A-208ENST00000484246 TOX3O15405 576 aaPredicted RBP15.49■□□□□ 0.07
UPF3A-208ENST00000484246 APOA4P06727 396 aa15.49■□□□□ 0.07
UPF3A-208ENST00000484246 PKMP14618 531 aaKnown RBP15.49■□□□□ 0.07
UPF3A-208ENST00000484246 EIF3BP55884 814 aaKnown RBP15.49■□□□□ 0.07
UPF3A-208ENST00000484246 GABREP78334 506 aa15.49■□□□□ 0.07
UPF3A-208ENST00000484246 HSP90AA5PQ58FG0 334 aa15.49■□□□□ 0.07
UPF3A-208ENST00000484246 DUS1LQ6P1R4 473 aaKnown RBP15.49■□□□□ 0.07
UPF3A-208ENST00000484246 KLHL35Q6PF15 583 aa15.49■□□□□ 0.07
UPF3A-208ENST00000484246 ZDHHC24Q6UX98 284 aa15.49■□□□□ 0.07
UPF3A-208ENST00000484246 DENND6AQ8IWF6 608 aa15.49■□□□□ 0.07
UPF3A-208ENST00000484246 ACVR1CQ8NER5 493 aa15.49■□□□□ 0.07
UPF3A-208ENST00000484246 TFGQ92734 400 aaPredicted RBP15.49■□□□□ 0.07
UPF3A-208ENST00000484246 KCNJ9Q92806 393 aa15.49■□□□□ 0.07
UPF3A-208ENST00000484246 CCDC74BQ96LY2 380 aa15.49■□□□□ 0.07
UPF3A-208ENST00000484246 CMKLR1Q99788 373 aa15.49■□□□□ 0.07
UPF3A-208ENST00000484246 FAM129AQ9BZQ8 928 aa15.49■□□□□ 0.07
UPF3A-208ENST00000484246 B3GNT4Q9C0J1 378 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms