RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 LRRTM2O43300 516 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 ZNF749O43361 778 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 PTPN3P26045 913 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 SPAM1P38567 509 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 GABRA4P48169 554 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 WNT3AP56704 352 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 WASHC5Q12768 1159 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 MYBPC3Q14896 1274 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 TEX44Q53QW1 395 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 DCAF10Q5QP82 559 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 TMTC4Q5T4D3 741 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 VWA5B1Q5TIE3 1220 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 SP5Q6BEB4 398 aaPredicted RBP12.5□□□□□ -0.41
UBR4-213ENST00000483922 ALKBH5Q6P6C2 394 aaKnown RBP12.5□□□□□ -0.41
UBR4-213ENST00000483922 CDHR3Q6ZTQ4 885 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 MAP7D3Q8IWC1 876 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 CARFQ8N187 725 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 SLC25A41Q8N5S1 370 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 OR2L2Q8NH16 312 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 ZFPM2Q8WW38 1151 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 OXNAD1Q96HP4 312 aaPredicted RBP12.5□□□□□ -0.41
UBR4-213ENST00000483922 SGSM3Q96HU1 749 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 TRAPPC9Q96Q05 1148 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 PITPNM3Q9BZ71 974 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 SAE1Q9UBE0 346 aaPredicted RBP12.5□□□□□ -0.41
UBR4-213ENST00000483922 FAM8A1Q9UBU6 413 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 CCDC88CQ9P219 2028 aa12.5□□□□□ -0.41
UBR4-213ENST00000483922 HIVEP1P15822 2718 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 SEC16AO15027 2179 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 GLYATL1P3A0A0U1RQE8 302 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 ARHGAP10A1A4S6 786 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 BTN3A1O00481 513 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 POLBP06746 335 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 UMODP07911 640 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 MSL3P1P0C860 447 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 CDH3P22223 829 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 GRNP28799 593 aaKnown RBP12.49□□□□□ -0.41
UBR4-213ENST00000483922 PBX1P40424 430 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 PREPP48147 710 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 GLRBP48167 497 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 RRADP55042 308 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 SOX8P57073 446 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 SSPNQ14714 243 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 ZIC1Q15915 447 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 KYNUQ16719 465 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 ZNF658BQ4V348 819 aaPredicted RBP12.49□□□□□ -0.41
UBR4-213ENST00000483922 FIGNQ5HY92 759 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 LDLRAP1Q5SW96 308 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 PPP1R32Q7Z5V6 425 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 ZNF398Q8TD17 642 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 UBE2Q2Q8WVN8 375 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 MARVELD3Q96A59 401 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 PHF12Q96QT6 1004 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 SPRTNQ9H040 489 aaPredicted RBP12.49□□□□□ -0.41
UBR4-213ENST00000483922 SLC22A11Q9NSA0 550 aa12.49□□□□□ -0.41
UBR4-213ENST00000483922 SETD2Q9BYW2 2564 aaPredicted RBP12.49□□□□□ -0.41
UBR4-213ENST00000483922 MDC1Q14676 2089 aaKnown RBP12.49□□□□□ -0.41
UBR4-213ENST00000483922 LDB2O43679 373 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 TPBGLP0DKB5 382 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 NFKB1P19838 968 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 HLA-DPA1P20036 260 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 CYP2A7P20853 494 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 ADCY2Q08462 1091 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 NFKBIBQ15653 356 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 ZRSR2Q15696 482 aaKnown RBP12.48□□□□□ -0.41
UBR4-213ENST00000483922 PPP2R5EQ16537 467 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 C1orf189Q5VU69 101 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 MLIPQ5VWP3 458 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 CFAP206Q8IYR0 622 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 ADGRF3Q8IZF5 1079 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 SLC34A3Q8N130 599 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 ST6GALNAC3Q8NDV1 305 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 PHC3Q8NDX5 983 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 SYN2Q92777 582 aaPredicted RBP12.48□□□□□ -0.41
UBR4-213ENST00000483922 LINC00615Q96LM1 132 aaPredicted RBP12.48□□□□□ -0.41
UBR4-213ENST00000483922 GBP5Q96PP8 586 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 GORASP1Q9BQQ3 440 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 TRABDQ9H4I3 376 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 SMOXQ9NWM0 555 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 P4HTMQ9NXG6 502 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 SERTAD3Q9UJW9 196 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 ACSL5Q9ULC5 683 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 ENTPD4Q9Y227 616 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 CDYLQ9Y232 598 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 OSGIN2Q9Y236 505 aa12.48□□□□□ -0.41
UBR4-213ENST00000483922 A0A0A6YYK5 440 aaPredicted RBP12.47□□□□□ -0.41
UBR4-213ENST00000483922 CCDC78A2IDD5 438 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 LRRD1A4D1F6 860 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 ZNF487B1APH4 448 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 ZG16O60844 167 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 KRT38O76015 456 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 EPOP01588 193 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 SERPING1P05155 500 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 ATXN8OSP0DMR3 200 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 PDHA2P29803 388 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 HADHAP40939 763 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 XIAPP98170 497 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 TYRO3Q06418 890 aa12.47□□□□□ -0.41
UBR4-213ENST00000483922 MSLNQ13421 630 aaPredicted RBP12.47□□□□□ -0.41
UBR4-213ENST00000483922 PRKD1Q15139 912 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms