RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 CDK14O94921 469 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 NPPAP01160 153 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 C7P10643 843 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 GRK4P32298 578 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 GPR15P49685 360 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 ZNF140P52738 457 aaPredicted RBP12.29□□□□□ -0.44
LINC00477-201ENST00000483544 GNA12Q03113 381 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 ZNF33BQ06732 778 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 LCP2Q13094 533 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 ANKS6Q68DC2 871 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 PAOXQ6QHF9 649 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 PRR23BQ6ZRT6 265 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 ANKS3Q6ZW76 656 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 CHST9Q7L1S5 443 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 DHFR2Q86XF0 187 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 CHERPQ8IWX8 916 aaKnown RBP12.29□□□□□ -0.44
LINC00477-201ENST00000483544 LINC00518Q8N0U6 118 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 LILRA2Q8N149 483 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 ANKFN1Q8N957 763 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 PJA1Q8NG27 643 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 BLOC1S5Q8TDH9 187 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 S100ZQ8WXG8 99 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 TOE1Q96GM8 510 aaKnown RBP12.29□□□□□ -0.44
LINC00477-201ENST00000483544 TMEM175Q9BSA9 504 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 C1QTNF7Q9BXJ2 289 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 RAD21L1Q9H4I0 556 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 AKTIPQ9H8T0 292 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 ACSS2Q9NR19 701 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 PNPLA3Q9NST1 481 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 POLR3BQ9NW08 1133 aaPredicted RBP12.29□□□□□ -0.44
LINC00477-201ENST00000483544 KCTD5Q9NXV2 234 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 MRPL39Q9NYK5 338 aaKnown RBP12.29□□□□□ -0.44
LINC00477-201ENST00000483544 DNMT3LQ9UJW3 386 aa12.29□□□□□ -0.44
LINC00477-201ENST00000483544 TBC1D4O60343 1298 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 CLDN11O75508 207 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 RHOBTB1O94844 696 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 ECDO95905 644 aaPredicted RBP12.28□□□□□ -0.44
LINC00477-201ENST00000483544 RETP07949 1114 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 BMP2P12643 396 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 ZNF26P17031 533 aaPredicted RBP12.28□□□□□ -0.44
LINC00477-201ENST00000483544 PSMC3P17980 439 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 CLCN4P51793 760 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 CYP4F2P78329 520 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 TIAL1Q01085 375 aaKnown RBP eCLIP12.28□□□□□ -0.44
LINC00477-201ENST00000483544 CYP4F3Q08477 520 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 IHHQ14623 411 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 INPP5AQ14642 412 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 CDK10Q15131 360 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 MGAT5BQ3V5L5 792 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 AARS2Q5JTZ9 985 aaKnown RBP12.28□□□□□ -0.44
LINC00477-201ENST00000483544 UGT3A1Q6NUS8 523 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 IYDQ6PHW0 289 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 TRAF7Q6Q0C0 670 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 ZNF783Q6ZMS7 281 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 LYSMD3Q7Z3D4 306 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 RAVER1Q8IY67 606 aaKnown RBP12.28□□□□□ -0.44
LINC00477-201ENST00000483544 ABI1Q8IZP0 508 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 LGI2Q8N0V4 545 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 FBXO39Q8N4B4 442 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 OR2T34Q8NGX1 318 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 OR2T3Q8NH03 318 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 TWIST2Q8WVJ9 160 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 PMEPA1Q969W9 287 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 PLD4Q96BZ4 506 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 CINPQ9BW66 212 aaPredicted RBP12.28□□□□□ -0.44
LINC00477-201ENST00000483544 TRIM54Q9BYV2 358 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 HMG20AQ9NP66 347 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 MID1IP1Q9NPA3 183 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 SDR39U1Q9NRG7 319 aaPredicted RBP12.28□□□□□ -0.44
LINC00477-201ENST00000483544 TRMT13Q9NUP7 481 aaKnown RBP12.28□□□□□ -0.44
LINC00477-201ENST00000483544 MBD2Q9UBB5 411 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 EBF1Q9UH73 591 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 GABRQQ9UN88 632 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 CRYL1Q9Y2S2 319 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 FIS1Q9Y3D6 152 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 PCDHGA10Q9Y5H3 936 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 OAS3Q9Y6K5 1087 aaKnown RBP12.28□□□□□ -0.44
LINC00477-201ENST00000483544 THSD7BQ9C0I4 1608 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 A0A0J9YYE9 177 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 A6NL46 340 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 FAM155AB1AL88 458 aaPredicted RBP12.28□□□□□ -0.44
LINC00477-201ENST00000483544 CLDN25C9JDP6 229 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 F8W810 466 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 H3BMQ9 156 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 MUSKO15146 869 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 INSIG1O15503 277 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 B4GALT3O60512 393 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 TLR5O60602 858 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 ADAM11O75078 769 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 NDUFS3O75489 264 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 EPN2O95208 641 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 RPS17P08708 135 aaKnown RBP12.28□□□□□ -0.44
LINC00477-201ENST00000483544 MTHFD1P11586 935 aaKnown RBP12.28□□□□□ -0.44
LINC00477-201ENST00000483544 FCGR1AP12314 374 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 MTHFD2P13995 350 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 GFAPP14136 432 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 CD1EP15812 388 aa12.28□□□□□ -0.44
LINC00477-201ENST00000483544 HOXD9P28356 352 aaPredicted RBP12.28□□□□□ -0.44
LINC00477-201ENST00000483544 ATP5C1P36542 298 aaKnown RBP12.28□□□□□ -0.44
LINC00477-201ENST00000483544 ACVRL1P37023 503 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms