RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 EPB41L1Q9H4G0 881 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 C20orf96Q9NUD7 363 aaPredicted RBP13.08□□□□□ -0.32
SSR1-208ENST00000483409 KLHL3Q9UH77 587 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 GNPTGQ9UJJ9 305 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 CDC23Q9UJX2 597 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 LOXL2Q9Y4K0 774 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 CELSR3Q9NYQ7 3312 aa13.08□□□□□ -0.32
SSR1-208ENST00000483409 SLC5A10A0PJK1 596 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 FAM187AA6NFU0 413 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 TNFSF15O95150 251 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 JMJD7P0C870 316 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 PGAM1P18669 254 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 ITIH1P19827 911 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 OGNP20774 298 aaKnown RBP13.07□□□□□ -0.32
SSR1-208ENST00000483409 RBMS1P29558 406 aaKnown RBP13.07□□□□□ -0.32
SSR1-208ENST00000483409 FMO4P31512 558 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 CCR7P32248 378 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 CKAP4Q07065 602 aaKnown RBP13.07□□□□□ -0.32
SSR1-208ENST00000483409 EIF3IQ13347 325 aaKnown RBP13.07□□□□□ -0.32
SSR1-208ENST00000483409 CRYMQ14894 314 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 HIF1AQ16665 826 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 LONRF1Q17RB8 773 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 TBC1D25Q3MII6 688 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 CTSL3PQ5NE16 218 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 RNF187Q5TA31 235 aaPredicted RBP13.07□□□□□ -0.32
SSR1-208ENST00000483409 ZNF572Q7Z3I7 529 aaPredicted RBP13.07□□□□□ -0.32
SSR1-208ENST00000483409 MAATS1Q7Z4T9 603 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 PDZD3Q86UT5 571 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 CILP2Q8IUL8 1156 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 IGDCC3Q8IVU1 814 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 DENND6AQ8IWF6 608 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 UNC5BQ8IZJ1 945 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 PDIK1LQ8N165 341 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.07□□□□□ -0.32
SSR1-208ENST00000483409 PHC3Q8NDX5 983 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 LPGAT1Q92604 370 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 TMEM159Q96B96 161 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 CFAP36Q96G28 342 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 TGM7Q96PF1 710 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 FERD3LQ96RJ6 166 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 CMKLR1Q99788 373 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 EBNA1BP2Q99848 306 aaKnown RBP13.07□□□□□ -0.32
SSR1-208ENST00000483409 ERP44Q9BS26 406 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 PISDQ9UG56 409 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 CHMP2BQ9UQN3 213 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 CRYL1Q9Y2S2 319 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 RAXQ9Y2V3 346 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 PCDHGA8Q9Y5G5 932 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 HEBP2Q9Y5Z4 205 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 COLEC10Q9Y6Z7 277 aa13.07□□□□□ -0.32
SSR1-208ENST00000483409 SNRNP200O75643 2136 aaKnown RBP13.06□□□□□ -0.32
SSR1-208ENST00000483409 USP24Q9UPU5 2620 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 SMAPO00193 183 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 PFDN6O15212 129 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 TP73O15350 636 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 TLX3O43711 291 aaPredicted RBP13.06□□□□□ -0.32
SSR1-208ENST00000483409 DXOO77932 396 aaKnown RBP13.06□□□□□ -0.32
SSR1-208ENST00000483409 RPS3P23396 243 aaKnown RBP eCLIP13.06□□□□□ -0.322e-20■■□□□ 12.7
SSR1-208ENST00000483409 ETV5P41161 510 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 ELK3P41970 407 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 SLC1A2P43004 574 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 CAPZBP47756 277 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 CD151P48509 253 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 ARL4CP56559 192 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 PPP1CAP62136 330 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 HSPA14Q0VDF9 509 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 CTBP1Q13363 440 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 TRA2AQ13595 282 aaKnown RBP eCLIP13.06□□□□□ -0.328e-9■■■■■ 27
SSR1-208ENST00000483409 ZNF789Q5FWF6 425 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 IRGCQ6NXR0 463 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 CENPUQ71F23 418 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 KCNMB4Q86W47 210 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 LRRC6Q86X45 466 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 PLXDC1Q8IUK5 500 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 VRK3Q8IV63 474 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 LSMEM2Q8N112 164 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 TFGQ92734 400 aaPredicted RBP13.06□□□□□ -0.32
SSR1-208ENST00000483409 FAM136AQ96C01 138 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 TCF12Q99081 682 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 WDR83Q9BRX9 315 aaKnown RBP13.06□□□□□ -0.32
SSR1-208ENST00000483409 HGH1Q9BTY7 390 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 CARD6Q9BX69 1037 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 KIR3DX1Q9H7L2 352 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 ASCL3Q9NQ33 180 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 FBXO6Q9NRD1 293 aaPredicted RBP13.06□□□□□ -0.32
SSR1-208ENST00000483409 AKAP7Q9P0M2 348 aaPredicted RBP13.06□□□□□ -0.32
SSR1-208ENST00000483409 SLC24A2Q9UI40 661 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 FAM169AQ9Y6X4 670 aa13.06□□□□□ -0.32
SSR1-208ENST00000483409 MN1Q10571 1320 aaPredicted RBP13.06□□□□□ -0.32
SSR1-208ENST00000483409 SRRM3A6NNA2 597 aaPredicted RBP13.05□□□□□ -0.32
SSR1-208ENST00000483409 BHMG1C9JSJ3 638 aaPredicted RBP13.05□□□□□ -0.32
SSR1-208ENST00000483409 HGSO14964 777 aaPredicted RBP13.05□□□□□ -0.32
SSR1-208ENST00000483409 CAPN5O15484 640 aaPredicted RBP13.05□□□□□ -0.32
SSR1-208ENST00000483409 NIPSNAP2O75323 286 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 TTC4O95801 387 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 APOA4P06727 396 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 ERVK-10P10266 1014 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 AOAHP28039 575 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 NDUFS1P28331 727 aa13.05□□□□□ -0.32
SSR1-208ENST00000483409 CSTF2P33240 577 aaKnown RBP eCLIP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms