RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 ABRAXAS1Q6UWZ7 409 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 CPNE9Q8IYJ1 553 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 ARL14Q8N4G2 192 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 BAHD1Q8TBE0 780 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-224ENST00000483359 GLMNQ92990 594 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 CAVIN3Q969G5 261 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 INSM2Q96T92 566 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-224ENST00000483359 ZNF624Q9P2J8 865 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-224ENST00000483359 SLC39A10Q9ULF5 831 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 CORO1CQ9ULV4 474 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-224ENST00000483359 VWA7Q9Y334 891 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 IKBKGQ9Y6K9 419 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 GOLGA4Q13439 2230 aaKnown RBP17.44■□□□□ 0.38
CPNE1-224ENST00000483359 SLC30A4O14863 429 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 SHBGP04278 402 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 INHBAP08476 426 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 SPRP35270 261 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-224ENST00000483359 PDAP1Q13442 181 aaKnown RBP17.44■□□□□ 0.38
CPNE1-224ENST00000483359 ACSBG2Q5FVE4 666 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 AGAP9Q5VTM2 703 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 OGFOD3Q6PK18 319 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 TRIM48Q8IWZ4 208 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 FAM181AQ8N9Y4 354 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 CXorf40BQ96DE9 158 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 PADI4Q9UM07 663 aa17.44■□□□□ 0.38
CPNE1-224ENST00000483359 COL5A1P20908 1838 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-224ENST00000483359 IFRD1O00458 451 aaPredicted RBP17.43■□□□□ 0.38
CPNE1-224ENST00000483359 KPNA5O15131 536 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 GPC4O75487 556 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 TUBBP07437 444 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 ITGA2BP08514 1039 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 SLC2A4P14672 509 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 FDXRP22570 491 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 MSH2P43246 934 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 HHEXQ03014 270 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 RPA4Q13156 261 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 RPE65Q16518 533 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 MROH9Q5TGP6 573 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 WASH2PQ6VEQ5 465 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 PDZD3Q86UT5 571 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 CFAP61Q8NHU2 1237 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 SLC44A1Q8WWI5 657 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 SLC32A1Q9H598 525 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 WASH6PQ9NQA3 447 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 CPNE7Q9UBL6 633 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 RNF215Q9Y6U7 377 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 DCHS1Q96JQ0 3298 aa17.43■□□□□ 0.38
CPNE1-224ENST00000483359 KIR2DS5A0A0G2JLQ3 304 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 A0A0G2JNG1 304 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 KIR2DS3K7RE56 304 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 GIPC1O14908 333 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 CKMT1AP12532 417 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 SLC19A1P41440 591 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 RPIAP49247 311 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 TAS2R39P59534 338 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 ABRQ12979 859 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 USP10Q14694 798 aaKnown RBP17.42■□□□□ 0.38
CPNE1-224ENST00000483359 KIR2DS5Q14953 304 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 TTLL9Q3SXZ7 439 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 MAP9Q49MG5 647 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 PLEKHS1Q5SXH7 462 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 PAQR3Q6TCH7 311 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 CEP97Q8IW35 865 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 SLC22A15Q8IZD6 547 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 GPR22Q99680 433 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 LRIT1Q9P2V4 623 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 DHRS7Q9Y394 339 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 OR5K4A6NMS3 321 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 TM4SF5O14894 197 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 CASC3O15234 703 aaKnown RBP17.42■□□□□ 0.38
CPNE1-224ENST00000483359 PPM1DO15297 605 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 VIPP01282 170 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 MTHFD1P11586 935 aaKnown RBP17.42■□□□□ 0.38
CPNE1-224ENST00000483359 CKMT2P17540 419 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 NOVA1P51513 510 aaKnown RBP17.42■□□□□ 0.38
CPNE1-224ENST00000483359 SLC12A2P55011 1212 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 TRIP6Q15654 476 aaKnown RBP17.42■□□□□ 0.38
CPNE1-224ENST00000483359 CAPRIN2Q6IMN6 1127 aaKnown RBP17.42■□□□□ 0.38
CPNE1-224ENST00000483359 UGT3A1Q6NUS8 523 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 EFL1Q7Z2Z2 1120 aaKnown RBP17.42■□□□□ 0.38
CPNE1-224ENST00000483359 CMC1Q7Z7K0 106 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 SLC9B2Q86UD5 537 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 PHC3Q8NDX5 983 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 MYRIPQ8NFW9 859 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 OR2W6PQ8NHA6 318 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 JPH3Q8WXH2 748 aaPredicted RBP17.42■□□□□ 0.38
CPNE1-224ENST00000483359 INPP5DQ92835 1189 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 CCDC74AQ96AQ1 378 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 STN1Q9H668 368 aaKnown RBP17.42■□□□□ 0.38
CPNE1-224ENST00000483359 ASF1AQ9Y294 204 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 NFS1Q9Y697 457 aa17.42■□□□□ 0.38
CPNE1-224ENST00000483359 SPAARA0A1B0GVQ0 90 aa17.41■□□□□ 0.38
CPNE1-224ENST00000483359 DCDC2BA2VCK2 349 aa17.41■□□□□ 0.38
CPNE1-224ENST00000483359 SMIM23A6NLE4 172 aa17.41■□□□□ 0.38
CPNE1-224ENST00000483359 RHPN2P1A8MT19 583 aa17.41■□□□□ 0.38
CPNE1-224ENST00000483359 PHGDHO43175 533 aaKnown RBP17.41■□□□□ 0.38
CPNE1-224ENST00000483359 CTIFO43310 598 aaKnown RBP17.41■□□□□ 0.38
CPNE1-224ENST00000483359 SLCO2B1O94956 709 aa17.41■□□□□ 0.38
CPNE1-224ENST00000483359 GCAP28676 217 aa17.41■□□□□ 0.38
CPNE1-224ENST00000483359 PLOD1Q02809 727 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms