RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 RFPL1O75677 317 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 SCRG1O75711 98 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 ZBTB11O95625 1053 aaPredicted RBP14.85□□□□□ -0.03
LIMS3-203ENST00000480744 ATP1B2P14415 290 aaPredicted RBP14.85□□□□□ -0.03
LIMS3-203ENST00000480744 CDH3P22223 829 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 NDUFS1P28331 727 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 HADHAP40939 763 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 PRLHRP49683 370 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 KPNA2P52292 529 aaKnown RBP14.85□□□□□ -0.03
LIMS3-203ENST00000480744 RPS18P62269 152 aaKnown RBP14.85□□□□□ -0.03
LIMS3-203ENST00000480744 TUBB4BP68371 445 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 TUBB2AQ13885 445 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 IGFBP7Q16270 282 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 DENND5AQ6IQ26 1287 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 RAD9BQ6WBX8 426 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 TAS2R42Q7RTR8 314 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 KIAA1328Q86T90 577 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 BPHLQ86WA6 291 aaPredicted RBP14.85□□□□□ -0.03
LIMS3-203ENST00000480744 D2HGDHQ8N465 521 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 ZFPM2Q8WW38 1151 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 MR1Q95460 341 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 DNAJC1Q96KC8 554 aaKnown RBP14.85□□□□□ -0.03
LIMS3-203ENST00000480744 LINC00615Q96LM1 132 aaPredicted RBP14.85□□□□□ -0.03
LIMS3-203ENST00000480744 FCRL4Q96PJ5 515 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 FERD3LQ96RJ6 166 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 CCM2Q9BSQ5 444 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 TUBB2BQ9BVA1 445 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 LACRTQ9GZZ8 138 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 AKIRIN1Q9H9L7 192 aaPredicted RBP14.85□□□□□ -0.03
LIMS3-203ENST00000480744 PCDHGA6Q9Y5G7 932 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 HEBP2Q9Y5Z4 205 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 NBASA2RRP1 2371 aa14.85□□□□□ -0.03
LIMS3-203ENST00000480744 DOPEY2Q9Y3R5 2298 aa14.84□□□□□ -0.03
LIMS3-203ENST00000480744 GSAPA4D1B5 854 aa14.84□□□□□ -0.03
LIMS3-203ENST00000480744 GRID2IPA4D2P6 1211 aa14.84□□□□□ -0.03
LIMS3-203ENST00000480744 GOLGA6L9A6NEM1 432 aa14.84□□□□□ -0.03
LIMS3-203ENST00000480744 CPNE3O75131 537 aaKnown RBP14.84□□□□□ -0.03
LIMS3-203ENST00000480744 TPH1P17752 444 aa14.84□□□□□ -0.03
LIMS3-203ENST00000480744 CDKN1CP49918 316 aaPredicted RBP14.84□□□□□ -0.03
LIMS3-203ENST00000480744 RPS15P62841 145 aaKnown RBP14.84□□□□□ -0.03
LIMS3-203ENST00000480744 MSLNQ13421 630 aaPredicted RBP14.84□□□□□ -0.03
LIMS3-203ENST00000480744 CAPRIN2Q6IMN6 1127 aaKnown RBP14.84□□□□□ -0.03
LIMS3-203ENST00000480744 TAB3Q8N5C8 712 aaPredicted RBP14.84□□□□□ -0.03
LIMS3-203ENST00000480744 FAM71DQ8N9W8 422 aa14.84□□□□□ -0.03
LIMS3-203ENST00000480744 HEXDCQ8WVB3 486 aa14.84□□□□□ -0.03
LIMS3-203ENST00000480744 LCN9Q8WX39 176 aa14.84□□□□□ -0.03
LIMS3-203ENST00000480744 TLR10Q9BXR5 811 aa14.84□□□□□ -0.03
LIMS3-203ENST00000480744 SRMSQ9H3Y6 488 aa14.84□□□□□ -0.03
LIMS3-203ENST00000480744 COG4Q9H9E3 785 aa14.84□□□□□ -0.03
LIMS3-203ENST00000480744 KCND1Q9NSA2 647 aa14.84□□□□□ -0.03
LIMS3-203ENST00000480744 ZDHHC3Q9NYG2 299 aa14.84□□□□□ -0.03
LIMS3-203ENST00000480744 FEZ2Q9UHY8 353 aaPredicted RBP14.84□□□□□ -0.03
LIMS3-203ENST00000480744 AMFRQ9UKV5 643 aa14.84□□□□□ -0.03
LIMS3-203ENST00000480744 CCDC78A2IDD5 438 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 SLC9B1P1A6NJY1 282 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 AGAP14A8MT82 685 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 BTNL10A8MVZ5 291 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 K7EM74 188 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 IFRD1O00458 451 aaPredicted RBP14.83□□□□□ -0.04
LIMS3-203ENST00000480744 LDB2O43679 373 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 DNAJB5O75953 348 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 PRSS56P0CW18 603 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 VAV2P52735 878 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 PMS2P54278 862 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 KLRB1Q12918 225 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 POU6F1Q14863 301 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 GPR33Q49SQ1 333 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 ZNF449Q6P9G9 518 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 PEX26Q7Z412 305 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 SERPINA9Q86WD7 417 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 UBL4BQ8N7F7 174 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 LRRC57Q8N9N7 239 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 TEX19Q8NA77 164 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 ACVR1CQ8NER5 493 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 ZNF501Q96CX3 271 aaPredicted RBP14.83□□□□□ -0.04
LIMS3-203ENST00000480744 VPS37BQ9H9H4 285 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 FANCEQ9HB96 536 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 ARNT2Q9HBZ2 717 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 PIH1D1Q9NWS0 290 aaKnown RBP14.83□□□□□ -0.04
LIMS3-203ENST00000480744 TLK1Q9UKI8 766 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 POMT2Q9UKY4 750 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 PACSIN2Q9UNF0 486 aaPredicted RBP14.83□□□□□ -0.04
LIMS3-203ENST00000480744 PTPN13Q12923 2485 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 MED13Q9UHV7 2174 aa14.83□□□□□ -0.04
LIMS3-203ENST00000480744 C17orf113A0A1B0GUU1 675 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 ZNF189O75820 626 aaPredicted RBP14.82□□□□□ -0.04
LIMS3-203ENST00000480744 METTL18O95568 372 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 ACRV1P26436 265 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 PTPN4P29074 926 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 PREPP48147 710 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 FOXK1P85037 733 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 GPS2Q13227 327 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 PARP6Q2NL67 630 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 PRAMEF17Q5VTA0 474 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 TCTN3Q6NUS6 607 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 ASB18Q6ZVZ8 466 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 CARFQ8N187 725 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 CLDN19Q8N6F1 224 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 TTC13Q8NBP0 860 aa14.82□□□□□ -0.04
LIMS3-203ENST00000480744 PHC3Q8NDX5 983 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms