RNA–Protein interactions for RNA: ENST00000480340.1

DENND4B-208, Transcript of DENN domain containing 4B, human

TSL 2

Gene DENND4B, Length 2,530 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4B-208	ENST00000480340	PIAS3	Q9Y6X2	628 aa		13.91	□□□□□ -0.18
DENND4B-208	ENST00000480340	CCDC162P	A2VCL2	907 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	NPIPB15	A6NHN6	443 aa	Predicted RBP	13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	SOCS2	O14508	198 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	STX7	O15400	261 aa	Known RBP	13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	RPP40	O75818	363 aa	Known RBP	13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	CLDN7	O95471	211 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	GOT2	P00505	430 aa	Known RBP	13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	C8B	P07358	591 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	TIE1	P35590	1138 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	PON2	Q15165	354 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	KCTD21	Q4G0X4	260 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	KRT80	Q6KB66	452 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	LDB1	Q86U70	411 aa	Predicted RBP	13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	CHPF	Q8IZ52	775 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	KDM1B	Q8NB78	822 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	LPGAT1	Q92604	370 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	C1QTNF1	Q9BXJ1	281 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	PNPLA3	Q9NST1	481 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	NLE1	Q9NVX2	485 aa	Predicted RBP	13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	BCAP29	Q9UHQ4	241 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	SARDH	Q9UL12	918 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	LRRK1	Q38SD2	2015 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	PRORSD1P	A6NEY8	169 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	GOLGA8CP	A6NN73	597 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340		K7EQS6	105 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	KPNA3	O00505	521 aa	Predicted RBP	13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	ADAM23	O75077	832 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	ATE1	O95260	518 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	IL9	P15248	144 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	SLC1A2	P43004	574 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	METAP1	P53582	386 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	ACVR1	Q04771	509 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	TRIM25	Q14258	630 aa	Known RBP	13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	HERC3	Q15034	1050 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	LEXM	Q3ZCV2	418 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	LIPM	Q5VYY2	423 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	GPR180	Q86V85	440 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	SPATA6L	Q8N4H0	392 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	ITPKC	Q96DU7	683 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	ZFYVE1	Q9HBF4	777 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	FKBPL	Q9UIM3	349 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	SLC39A10	Q9ULF5	831 aa		13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	CNOT6	Q9ULM6	557 aa	Known RBP	13.9	□□□□□ -0.18
DENND4B-208	ENST00000480340	SLC7A4	O43246	635 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	TIPRL	O75663	272 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	PRSS56	P0CW18	603 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	ZNF12	P17014	697 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	CD247	P20963	164 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	BCAP31	P51572	246 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	ZNF460	Q14592	562 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	NHSL2	Q5HYW2	709 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	GPR153	Q6NV75	609 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	ZYG11A	Q6WRX3	759 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	KCTD4	Q8WVF5	259 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	OR8D1	Q8WZ84	308 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	PEX13	Q92968	403 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	SCRN2	Q96FV2	425 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	VPS39	Q96JC1	886 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	MFSD1	Q9H3U5	465 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	PRDM6	Q9NQX0	595 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	MARCH4	Q9P2E8	410 aa	Predicted RBP	13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	TMEM98	Q9Y2Y6	226 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	STON1	Q9Y6Q2	735 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	ZNF106	Q9H2Y7	1883 aa	Known RBP	13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	AHSG	P02765	367 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	MPO	P05164	745 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	OCM2	P0CE71	109 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	OCM	P0CE72	109 aa	Predicted RBP	13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	RXRG	P48443	463 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	RHD	Q02161	417 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	UGP2	Q16851	508 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	C2orf27A	Q580R0	203 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	ZNF805	Q5CZA5	627 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	BRAT1	Q6PJG6	821 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	CRTC1	Q6UUV9	634 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	DCDC5	Q6ZRR9	648 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	USP45	Q70EL2	814 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	CHSY3	Q70JA7	882 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	ZBTB46	Q86UZ6	589 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	CNTN4	Q8IWV2	1026 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	BORCS5	Q969J3	196 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	OMD	Q99983	421 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	MCMBP	Q9BTE3	642 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	IL17C	Q9P0M4	197 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	FBXO5	Q9UKT4	447 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	RIMKLB	Q9ULI2	386 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	FIS1	Q9Y3D6	152 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	PKP3	Q9Y446	797 aa		13.89	□□□□□ -0.19
DENND4B-208	ENST00000480340	PSMD12	O00232	456 aa	Predicted RBP	13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	DLGAP1	O14490	977 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	SDHD	O14521	159 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	EGF	P01133	1207 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	UGT1A6	P19224	532 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	HMOX2	P30519	316 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	HMGCL	P35914	325 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	POLR2L	P62875	67 aa	Known RBP	13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	TUBA4A	P68366	448 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	PRKAA1	Q13131	559 aa		13.88	□□□□□ -0.19
DENND4B-208	ENST00000480340	ELAVL3	Q14576	367 aa	Known RBP	13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms