RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 COL27A1Q8IZC6 1860 aaPredicted RBP19.29■□□□□ 0.68
LIME1-205ENST00000480139 TRBV23OR9-2A0A075B6M9 112 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 LILRA5A6NI73 299 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 E5RI56 91 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 IFRD1O00458 451 aaPredicted RBP19.29■□□□□ 0.68
LIME1-205ENST00000480139 OPA1O60313 960 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 VIPP01282 170 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 F7P08709 466 aaPredicted RBP19.29■□□□□ 0.68
LIME1-205ENST00000480139 ITGB6P18564 788 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 CHRM3P20309 590 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 CD9P21926 228 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 NDUFS1P28331 727 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 PDHA2P29803 388 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 ATP5DP30049 168 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 PHBP35232 272 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 EPHA4P54764 986 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 NAB1Q13506 487 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 GBX1Q14549 363 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 N4BP2L1Q5TBK1 243 aaPredicted RBP19.29■□□□□ 0.68
LIME1-205ENST00000480139 RAB44Q7Z6P3 723 aaPredicted RBP19.29■□□□□ 0.68
LIME1-205ENST00000480139 SPDYE1Q8NFV5 336 aaPredicted RBP19.29■□□□□ 0.68
LIME1-205ENST00000480139 C12orf66Q96MD2 445 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 MCMBPQ9BTE3 642 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 FUT8Q9BYC5 575 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 CDC42EP4Q9H3Q1 356 aaKnown RBP19.29■□□□□ 0.68
LIME1-205ENST00000480139 ANKZF1Q9H8Y5 726 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 NINJ2Q9NZG7 142 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 SLC17A6Q9P2U8 582 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 MED16Q9Y2X0 877 aa19.29■□□□□ 0.68
LIME1-205ENST00000480139 TCEA3O75764 348 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 ACADLP28330 430 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 CLCN7P51798 805 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 GPLD1P80108 840 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 HSPA14Q0VDF9 509 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 KYNUQ16719 465 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 CLPPQ16740 277 aaPredicted RBP19.28■□□□□ 0.68
LIME1-205ENST00000480139 TMEM26Q6ZUK4 368 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 ERMP1Q7Z2K6 904 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 STRA8Q7Z7C7 330 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 CACTIN-AS1Q8N1I8 211 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 SLC38A3Q99624 504 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 EPB41L1Q9H4G0 881 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 SMYD2Q9NRG4 433 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 IMP3Q9NV31 184 aaKnown RBP19.28■□□□□ 0.68
LIME1-205ENST00000480139 PSAT1Q9Y617 370 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 COLEC10Q9Y6Z7 277 aa19.28■□□□□ 0.68
LIME1-205ENST00000480139 NTN3O00634 580 aaPredicted RBP19.27■□□□□ 0.68
LIME1-205ENST00000480139 VPS26AO75436 327 aa19.27■□□□□ 0.68
LIME1-205ENST00000480139 INSM1Q01101 510 aaPredicted RBP19.27■□□□□ 0.68
LIME1-205ENST00000480139 SQSTM1Q13501 440 aa19.27■□□□□ 0.68
LIME1-205ENST00000480139 BRD3Q15059 726 aa19.27■□□□□ 0.68
LIME1-205ENST00000480139 TTLL9Q3SXZ7 439 aa19.27■□□□□ 0.68
LIME1-205ENST00000480139 CCDC157Q569K6 752 aa19.27■□□□□ 0.68
LIME1-205ENST00000480139 DHRS13Q6UX07 377 aa19.27■□□□□ 0.68
LIME1-205ENST00000480139 NAPRTQ6XQN6 538 aa19.27■□□□□ 0.68
LIME1-205ENST00000480139 ZC3HC1Q86WB0 502 aaKnown RBP19.27■□□□□ 0.68
LIME1-205ENST00000480139 ZBTB2Q8N680 514 aa19.27■□□□□ 0.68
LIME1-205ENST00000480139 FBF1Q8TES7 1133 aa19.27■□□□□ 0.68
LIME1-205ENST00000480139 TFGQ92734 400 aaPredicted RBP19.27■□□□□ 0.68
LIME1-205ENST00000480139 CPNE1Q99829 537 aa19.27■□□□□ 0.68
LIME1-205ENST00000480139 ABCG4Q9H172 646 aa19.27■□□□□ 0.68
LIME1-205ENST00000480139 LRRN3Q9H3W5 708 aa19.27■□□□□ 0.68
LIME1-205ENST00000480139 MVB12BQ9H7P6 319 aa19.27■□□□□ 0.68
LIME1-205ENST00000480139 DHRS7Q9Y394 339 aa19.27■□□□□ 0.68
LIME1-205ENST00000480139 PTPRBP23467 1997 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 IGHV1OR21-1A0A087WYE8 117 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 CXorf49A8MYA2 514 aaPredicted RBP19.26■□□□□ 0.67
LIME1-205ENST00000480139 EIF3FO00303 357 aaPredicted RBP19.26■□□□□ 0.67
LIME1-205ENST00000480139 B4GAT1O43505 415 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 RPLP0P05388 317 aaKnown RBP19.26■□□□□ 0.67
LIME1-205ENST00000480139 SKIV2L2P42285 1042 aaKnown RBP19.26■□□□□ 0.67
LIME1-205ENST00000480139 CSE1LP55060 971 aaKnown RBP19.26■□□□□ 0.67
LIME1-205ENST00000480139 GPR18Q14330 331 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 KBTBD12Q3ZCT8 623 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 CDCP2Q5VXM1 449 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 FAM45BPQ6NSW5 357 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 UGT3A1Q6NUS8 523 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 TMPRSS12Q86WS5 348 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 VRK3Q8IV63 474 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 FAM45AQ8TCE6 357 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 RHOJQ9H4E5 214 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 KIR3DX1Q9H7L2 352 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 KCNK4Q9NYG8 393 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 TAS2R13Q9NYV9 303 aa19.26■□□□□ 0.67
LIME1-205ENST00000480139 CFAP20Q9Y6A4 193 aaKnown RBP19.26■□□□□ 0.67
LIME1-205ENST00000480139 A0A1W2PQM1 296 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 CBSLP0DN79 551 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 ALDH4A1P30038 563 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 CBSP35520 551 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 GP5P40197 560 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 OR1D5P58170 312 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 CCL7P80098 99 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 TIAL1Q01085 375 aaKnown RBP eCLIP19.25■□□□□ 0.67
LIME1-205ENST00000480139 RBM20Q5T481 1227 aaKnown RBP19.25■□□□□ 0.67
LIME1-205ENST00000480139 UNC5DQ6UXZ4 953 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 NEK10Q6ZWH5 1172 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 TRMT10CQ7L0Y3 403 aaKnown RBP19.25■□□□□ 0.67
LIME1-205ENST00000480139 GALNT15Q8N3T1 639 aa19.25■□□□□ 0.67
LIME1-205ENST00000480139 Q8N9G6 341 aaPredicted RBP19.25■□□□□ 0.67
LIME1-205ENST00000480139 GIMAP7Q8NHV1 300 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms