RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 PVRP15151 417 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 KCNC4Q03721 635 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 TLE1Q04724 770 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 KLF1Q13351 362 aaPredicted RBP16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 DNASE1L3Q13609 305 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 IL11RAQ14626 422 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 CAPRIN2Q6IMN6 1127 aaKnown RBP16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 ARMC6Q6NXE6 501 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 ATG14Q6ZNE5 492 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 UBL4BQ8N7F7 174 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 OR52K1Q8NGK4 314 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 HM13Q8TCT9 377 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 ABHD17AQ96GS6 310 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 RAB33BQ9H082 229 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 TRIT1Q9H3H1 467 aaKnown RBP16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 CLMPQ9H6B4 373 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 KIR3DX1Q9H7L2 352 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 PDE7BQ9NP56 450 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 LHX9Q9NQ69 397 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 FGF21Q9NSA1 209 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 ZDHHC3Q9NYG2 299 aa16.93■□□□□ 0.3
ECHDC1-216ENST00000479525 GOLGA6L9A6NEM1 432 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 TLCD2A6NGC4 264 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 AGAP14A8MT82 685 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 DNAJB5O75953 348 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 RALBP11234 206 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 ACRV1P26436 265 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 GRIA1P42261 906 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 CSE1LP55060 971 aaKnown RBP16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 KIF5AQ12840 1032 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 CHAF1BQ13112 559 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 SNX1Q13596 522 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 MAP7Q14244 749 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 DBN1Q16643 649 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 PARP6Q2NL67 630 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 LCN10Q6JVE6 187 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 C9orf43Q8TAL5 461 aaPredicted RBP16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 SLC35B2Q8TB61 432 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 C1orf54Q8WWF1 131 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 UBXN4Q92575 508 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 ULK4Q96C45 1275 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 ZNF514Q96K75 400 aaPredicted RBP16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 EPN3Q9H201 632 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 NLE1Q9NVX2 485 aaPredicted RBP16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 SMARCAL1Q9NZC9 954 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 SLC2A6Q9UGQ3 507 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 ACSL5Q9ULC5 683 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 TP53TG5Q9Y2B4 290 aa16.92■□□□□ 0.3
ECHDC1-216ENST00000479525 PIPSLA2A3N6 862 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 SLC9B1P1A6NJY1 282 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 BTN3A3O00478 584 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 BTN3A1O00481 513 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 CDH3P22223 829 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 HADHAP40939 763 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 LMAN1P49257 510 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 IGFBP7Q16270 282 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 KLHL35Q6PF15 583 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 TRIM73Q86UV7 250 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 KLHDC8BQ8IXV7 354 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 LMNTD1Q8N9Z9 388 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 SLC38A9Q8NBW4 561 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 CDKN2AIPNLQ96HQ2 116 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 LINC00615Q96LM1 132 aaPredicted RBP16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 CATSPER2Q96P56 530 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 EFHD1Q9BUP0 239 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 TWSG1Q9GZX9 223 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 OR52A5Q9H2C5 316 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 ADNPQ9H2P0 1102 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 ACTL8Q9H568 366 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 LRRC40Q9H9A6 602 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 ARNT2Q9HBZ2 717 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 ASH1LQ9NR48 2969 aaKnown RBP16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 PLAGL1Q9UM63 463 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 PCSK5Q92824 1860 aa16.91■□□□□ 0.3
ECHDC1-216ENST00000479525 TRBV5-4A0A0C4DH59 114 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 CFAP99D6REC4 459 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 SCRG1O75711 98 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 IFNB1P01574 187 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 CCNYL3P0C7X3 344 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 ST6GAL1P15907 406 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 ABRQ12979 859 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 GPS2Q13227 327 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 ZNF658BQ4V348 819 aaPredicted RBP16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 CPZQ66K79 652 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 TMEM126BQ8IUX1 230 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 D2HGDHQ8N465 521 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 GLIS1Q8NBF1 620 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 OR52E1Q8NGJ3 308 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 APOBEC4Q8WW27 367 aaKnown RBP16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 LCN9Q8WX39 176 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 HES6Q96HZ4 224 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 CCM2Q9BSQ5 444 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 SRMSQ9H3Y6 488 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 SEMA5BQ9P283 1151 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 IMPACTQ9P2X3 320 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 CIDEBQ9UHD4 219 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 PADI1Q9ULC6 663 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 GUCA1BQ9UMX6 200 aa16.9■□□□□ 0.3
ECHDC1-216ENST00000479525 PCDHB3Q9Y5E6 796 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms