RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 ZFP36L2P47974 494 aaKnown RBP20.91■□□□□ 0.94
SDF4-206ENST00000478938 PPP3CCP48454 512 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 SCNN1GP51170 649 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 SRP54P61011 504 aaKnown RBP20.91■□□□□ 0.94
SDF4-206ENST00000478938 RCAN2Q14206 197 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 ZMYND11Q15326 602 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 STXBP2Q15833 593 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 ZNF667Q5HYK9 610 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 RBM20Q5T481 1227 aaKnown RBP20.91■□□□□ 0.94
SDF4-206ENST00000478938 ANKS3Q6ZW76 656 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 TCTE3Q8IZS6 198 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 SETD9Q8NE22 299 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 CHCHD6Q9BRQ6 235 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.91■□□□□ 0.94
SDF4-206ENST00000478938 CDH9Q9ULB4 789 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 KCNE2Q9Y6J6 123 aa20.91■□□□□ 0.94
SDF4-206ENST00000478938 EEDO75530 441 aaKnown RBP20.9■□□□□ 0.94
SDF4-206ENST00000478938 CSF2P04141 144 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 SERPINF2P08697 491 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 LBPP18428 481 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 PIK3CBP42338 1070 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 KPNA2P52292 529 aaKnown RBP20.9■□□□□ 0.94
SDF4-206ENST00000478938 UFM1P61960 85 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 BAATQ14032 418 aaPredicted RBP20.9■□□□□ 0.94
SDF4-206ENST00000478938 LETMD1Q6P1Q0 360 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 SYVN1Q86TM6 617 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 LIX1LQ8IVB5 337 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 OR8H1Q8NGG4 311 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 EXT2Q93063 718 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 CCDC126Q96EE4 140 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 SLC47A1Q96FL8 570 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 TMPRSS4Q9NRS4 437 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 LIMD1Q9UGP4 676 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 A0A087X1B8 175 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 A0A1W2PQ09 198 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 CCDC182A6NF36 153 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 PFKMP08237 780 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 TIGD6Q17RP2 521 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 PIK3R6Q5UE93 754 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 MAP1SQ66K74 1059 aaPredicted RBP20.9■□□□□ 0.94
SDF4-206ENST00000478938 METTL2BQ6P1Q9 378 aaKnown RBP20.9■□□□□ 0.94
SDF4-206ENST00000478938 CPA6Q8N4T0 437 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 C12orf29Q8N999 325 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 TRAF4Q9BUZ4 470 aaPredicted RBP20.9■□□□□ 0.94
SDF4-206ENST00000478938 BCO2Q9BYV7 579 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 ACTR8Q9H981 624 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 SCPEP1Q9HB40 452 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 NSMCE4AQ9NXX6 385 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 FAM198AQ9UFP1 575 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 TSPAN16Q9UKR8 245 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 PKP3Q9Y446 797 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 GPR45Q9Y5Y3 372 aa20.9■□□□□ 0.94
SDF4-206ENST00000478938 CILPO75339 1184 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 IGFBP5P24593 272 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 TNFSF8P32971 234 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 CBX5P45973 191 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 PLIN5Q00G26 463 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 HYAL2Q12891 473 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 ARSKQ6UWY0 536 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 KIAA1324Q6UXG2 1013 aaKnown RBP20.89■□□□□ 0.93
SDF4-206ENST00000478938 HERVK_113Q902F9 699 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 CDCA7Q9BWT1 371 aaPredicted RBP20.89■□□□□ 0.93
SDF4-206ENST00000478938 ZC4H2Q9NQZ6 224 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 ATP6V1HQ9UI12 483 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 LRRC14BA6NHZ5 514 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 TOR1AO14656 332 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 PGRP06401 933 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 HOXC6P09630 235 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 ITGAMP11215 1152 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 PTPN3P26045 913 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 ARL4AP40617 200 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 SLC1A2P43004 574 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 HOXC5Q00444 222 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 SEMA3BQ13214 749 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 TP53BP2Q13625 1128 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 UNC50Q53HI1 259 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 CYP4Z2PQ8N1L4 340 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 UBE2J2Q8N2K1 259 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 PNPLA1Q8N8W4 532 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 TAAR1Q96RJ0 339 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 BARD1Q99728 777 aaKnown RBP20.89■□□□□ 0.93
SDF4-206ENST00000478938 MYOCQ99972 504 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 MRM3Q9HC36 420 aaKnown RBP20.89■□□□□ 0.93
SDF4-206ENST00000478938 MID1IP1Q9NPA3 183 aa20.89■□□□□ 0.93
SDF4-206ENST00000478938 ZBTB24O43167 697 aaPredicted RBP20.88■□□□□ 0.93
SDF4-206ENST00000478938 NDUFA2O43678 99 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 SERPINI2O75830 405 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 RPLP0P05388 317 aaKnown RBP20.88■□□□□ 0.93
SDF4-206ENST00000478938 TNNI3P19429 210 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 GGT1P19440 569 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 KCNC1P48547 511 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 ZNF678Q5SXM1 525 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 DPP9Q86TI2 863 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 CYP4Z1Q86W10 505 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 OR5K1Q8NHB7 308 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 CLEC4DQ8WXI8 215 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 SMPD4Q9NXE4 827 aa20.88■□□□□ 0.93
SDF4-206ENST00000478938 LEF1Q9UJU2 399 aaPredicted RBP20.88■□□□□ 0.93
SDF4-206ENST00000478938 ZNF638Q14966 1978 aaKnown RBP20.88■□□□□ 0.93
SDF4-206ENST00000478938 A0A096LPI6 279 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms