RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	HDAC10	Q969S8	669 aa		13.46	□□□□□ -0.25
HDAC7-222	ENST00000477937	FERD3L	Q96RJ6	166 aa		13.46	□□□□□ -0.25
HDAC7-222	ENST00000477937	CD180	Q99467	661 aa		13.46	□□□□□ -0.25
HDAC7-222	ENST00000477937	MAP3K3	Q99759	626 aa		13.46	□□□□□ -0.25
HDAC7-222	ENST00000477937	ARHGAP9	Q9BRR9	750 aa		13.46	□□□□□ -0.25
HDAC7-222	ENST00000477937	EFHD1	Q9BUP0	239 aa		13.46	□□□□□ -0.25
HDAC7-222	ENST00000477937	ULBP3	Q9BZM4	244 aa		13.46	□□□□□ -0.25
HDAC7-222	ENST00000477937	OR52A5	Q9H2C5	316 aa		13.46	□□□□□ -0.25
HDAC7-222	ENST00000477937	ATM	Q13315	3056 aa		13.46	□□□□□ -0.25
HDAC7-222	ENST00000477937	UBA6	A0AVT1	1052 aa	Predicted RBP	13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	OR6C74	A6NCV1	312 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	TLCD2	A6NGC4	264 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937		F8W8V4	182 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	AP3B1	O00203	1094 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	LIN7A	O14910	233 aa	Predicted RBP	13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	C1QL1	O75973	258 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	DLGAP3	O95886	979 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	FTH1	P02794	183 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	ZSCAN5DP	P0CG00	497 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	FGF5	P12034	268 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	PPARG	P37231	505 aa	Predicted RBP	13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	ARL4D	P49703	201 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	PPP1CA	P62136	330 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	PRAME	P78395	509 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	BASP1	P80723	227 aa	Known RBP	13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	ABHD18	Q0P651	414 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	MAP7	Q14244	749 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	ZNF658B	Q4V348	819 aa	Predicted RBP	13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	AFTPH	Q6ULP2	937 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	PACS1	Q6VY07	963 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	CERS6	Q6ZMG9	384 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	PPP1R3B	Q86XI6	285 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	KMT5C	Q86Y97	462 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	SIDT2	Q8NBJ9	832 aa	Known RBP	13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	ACVR1C	Q8NER5	493 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	OR4E2	Q8NGC2	313 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	OR6P1	Q8NGX9	317 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	OR4L1	Q8NH43	312 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	LCN9	Q8WX39	176 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	EXTL1	Q92935	676 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	PEX13	Q92968	403 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	MED8	Q96G25	268 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	SLC41A2	Q96JW4	573 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	SLC12A9	Q9BXP2	914 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	GPN2	Q9H9Y4	310 aa	Predicted RBP	13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	PDE7B	Q9NP56	450 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	EIF2B3	Q9NR50	452 aa	Known RBP	13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	TCAF1	Q9Y4C2	921 aa		13.45	□□□□□ -0.26
HDAC7-222	ENST00000477937	ZNF891	A8MT65	544 aa	Predicted RBP	13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	GOT2	P00505	430 aa	Known RBP	13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	OR56A5	P0C7T3	313 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	PDHA2	P29803	388 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	KCNJ1	P48048	391 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	CYP4F2	P78329	520 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	HSD11B2	P80365	405 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	ACY1	Q03154	408 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	ACVR1	Q04771	509 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	PRKAA1	Q13131	559 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	FASTKD1	Q53R41	847 aa	Known RBP	13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	BPHL	Q86WA6	291 aa	Predicted RBP	13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	CARF	Q8N187	725 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	ZNF843	Q8N446	348 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	ESX1	Q8N693	406 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	PHC3	Q8NDX5	983 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	PPHLN1	Q8NEY8	458 aa	Known RBP	13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	ELMO1	Q92556	727 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	TFG	Q92734	400 aa	Predicted RBP	13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	SGSM3	Q96HU1	749 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	ELMO2	Q96JJ3	720 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	SLC45A3	Q96JT2	553 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	ZNF778	Q96MU6	729 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	SRMS	Q9H3Y6	488 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	MVB12B	Q9H7P6	319 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	CHRAC1	Q9NRG0	131 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	SLC2A6	Q9UGQ3	507 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	ANAPC5	Q9UJX4	755 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	JRKL	Q9Y4A0	524 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	PRSS21	Q9Y6M0	314 aa		13.44	□□□□□ -0.26
HDAC7-222	ENST00000477937	LOC101059948	A0A1B0GTJ6	334 aa		13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	SPAG6	O75602	509 aa		13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	KIAA0754	O94854	1291 aa		13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	FOLR1	P15328	257 aa		13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	POLR2C	P19387	275 aa	Predicted RBP	13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	PREP	P48147	710 aa		13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	NPY2R	P49146	381 aa		13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	KPNA2	P52292	529 aa	Known RBP	13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	SESN2	P58004	480 aa	Predicted RBP	13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	CDK16	Q00536	496 aa		13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	PLOD1	Q02809	727 aa	Predicted RBP	13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	TUBB3	Q13509	450 aa		13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	KCNAB1	Q14722	419 aa		13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	BRD3	Q15059	726 aa		13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	LINC00303	Q3SY05	128 aa		13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	AARS2	Q5JTZ9	985 aa	Known RBP	13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	PCID2	Q5JVF3	399 aa		13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	TMTC4	Q5T4D3	741 aa		13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	UNC5B	Q8IZJ1	945 aa		13.43	□□□□□ -0.26
HDAC7-222	ENST00000477937	STAMBPL1	Q96FJ0	436 aa		13.43	□□□□□ -0.26

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