RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 KLK10O43240 276 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 EFSO43281 561 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 UBXN7O94888 489 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 SLC2A4P14672 509 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 ARNTP27540 789 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 TNFRSF8P28908 595 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 ABCG1P45844 678 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 ACVR1Q04771 509 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 CLN3Q13286 438 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 BRD3Q15059 726 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 GPR33Q49SQ1 333 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 HIBCHQ6NVY1 386 aaPredicted RBP17.25■□□□□ 0.35
PTPN7-209ENST00000477554 WDR93Q6P2C0 686 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 WDR74Q6RFH5 385 aaPredicted RBP17.25■□□□□ 0.35
PTPN7-209ENST00000477554 ARHGAP22Q7Z5H3 698 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 LSMEM2Q8N112 164 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 NAT8LQ8N9F0 302 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 ART4Q93070 314 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 DCUN1D1Q96GG9 259 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 LINC00615Q96LM1 132 aaPredicted RBP17.25■□□□□ 0.35
PTPN7-209ENST00000477554 C12orf66Q96MD2 445 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 PPM1MQ96MI6 270 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 TGM7Q96PF1 710 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 RANBP9Q96S59 729 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 CMKLR1Q99788 373 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 IL1RAPL1Q9NZN1 696 aa17.25■□□□□ 0.35
PTPN7-209ENST00000477554 HEATR9A2RTY3 570 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 EFCAB7A8K855 629 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 GOLGA8KD6RF30 607 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 GOLGA8TH3BQL2 631 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 MTHFD1P11586 935 aaKnown RBP17.24■□□□□ 0.35
PTPN7-209ENST00000477554 ADRA1DP25100 572 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 EPHA4P54764 986 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 PLTPP55058 493 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 SKIDA1Q1XH10 827 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 PDZD3Q86UT5 571 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 CAND1Q86VP6 1230 aaKnown RBP17.24■□□□□ 0.35
PTPN7-209ENST00000477554 ZNF248Q8NDW4 579 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 KCNE4Q8WWG9 221 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.24■□□□□ 0.35
PTPN7-209ENST00000477554 MFSD3Q96ES6 412 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 BBC3Q96PG8 261 aaPredicted RBP17.24■□□□□ 0.35
PTPN7-209ENST00000477554 C19orf43Q9BQ61 176 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 COG4Q9H9E3 785 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 TREX1Q9NSU2 369 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 POT1Q9NUX5 634 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 B3GALT1Q9Y5Z6 326 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 DNMT3AQ9Y6K1 912 aaPredicted RBP17.24■□□□□ 0.35
PTPN7-209ENST00000477554 AHCTF1Q8WYP5 2266 aa17.24■□□□□ 0.35
PTPN7-209ENST00000477554 MN1Q10571 1320 aaPredicted RBP17.24■□□□□ 0.35
PTPN7-209ENST00000477554 IQCF5A8MTL0 148 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 TMX2-CTNND1H3BSU7 103 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 GOLGA8MH3BSY2 632 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 AP3B1O00203 1094 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 CAPN5O15484 640 aaPredicted RBP17.23■□□□□ 0.35
PTPN7-209ENST00000477554 VCLP18206 1134 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 ITGB6P18564 788 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 ARCN1P48444 511 aaKnown RBP17.23■□□□□ 0.35
PTPN7-209ENST00000477554 CARSP49589 748 aaKnown RBP17.23■□□□□ 0.35
PTPN7-209ENST00000477554 SH3BP2P78314 561 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 EIF3IQ13347 325 aaKnown RBP17.23■□□□□ 0.35
PTPN7-209ENST00000477554 TRADDQ15628 312 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 CAPRIN2Q6IMN6 1127 aaKnown RBP17.23■□□□□ 0.35
PTPN7-209ENST00000477554 CERS6Q6ZMG9 384 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 FAM92BQ6ZTR7 304 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 FAM129CQ86XR2 697 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 PHC3Q8NDX5 983 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 MCUQ8NE86 351 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 OR6P1Q8NGX9 317 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 PARD6BQ9BYG5 372 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 OR52A5Q9H2C5 316 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 STN1Q9H668 368 aaKnown RBP17.23■□□□□ 0.35
PTPN7-209ENST00000477554 UCK1Q9HA47 277 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 WDR70Q9NW82 654 aa17.23■□□□□ 0.35
PTPN7-209ENST00000477554 MTRF1LQ9UGC7 380 aaKnown RBP17.23■□□□□ 0.35
PTPN7-209ENST00000477554 HGSO14964 777 aaPredicted RBP17.22■□□□□ 0.35
PTPN7-209ENST00000477554 RRP8O43159 456 aaKnown RBP17.22■□□□□ 0.35
PTPN7-209ENST00000477554 C9P02748 559 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 AMD1P17707 334 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 WT1P19544 449 aaPredicted RBP17.22■□□□□ 0.35
PTPN7-209ENST00000477554 SEPHS1P49903 392 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 NAA30Q147X3 362 aaPredicted RBP17.22■□□□□ 0.35
PTPN7-209ENST00000477554 ANKS6Q68DC2 871 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 FBXO38Q6PIJ6 1188 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 LRRC69Q6ZNQ3 347 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 VASH2Q86V25 355 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 OR4L1Q8NH43 312 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 FBXO25Q8TCJ0 367 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 SH3KBP1Q96B97 665 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 ZNF514Q96K75 400 aaPredicted RBP17.22■□□□□ 0.35
PTPN7-209ENST00000477554 CCM2Q9BSQ5 444 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.22■□□□□ 0.35
PTPN7-209ENST00000477554 TSPYL1Q9H0U9 437 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 PRORYQ9H606 182 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 RAB21Q9UL25 225 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 PCDHGA7Q9Y5G6 932 aa17.22■□□□□ 0.35
PTPN7-209ENST00000477554 TP73O15350 636 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 NVLO15381 856 aaKnown RBP17.21■□□□□ 0.35
PTPN7-209ENST00000477554 RALBP11234 206 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 HALP42357 657 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms