RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 MAGEA6P43360 314 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 RECQLP46063 649 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 NPTX2P47972 431 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ARCN1P48444 511 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 HOXA1P49639 335 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ATP4BP51164 291 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 PLA2G16P53816 162 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 SLC12A3P55017 1021 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 CDH15P55291 814 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 CXCR4P61073 352 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ACTR2P61160 394 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 PRAMEP78395 509 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ADARB1P78563 741 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 FLI1Q01543 452 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 FOXM1Q08050 763 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 CD300CQ08708 224 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 PRKAA1Q13131 559 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 NME3Q13232 169 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 RIN1Q13671 783 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 CEACAM7Q14002 265 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 PIGHQ14442 188 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 SMN1Q16637 294 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 RFX4Q33E94 735 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TBRG1Q3YBR2 411 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TFDP3Q5H9I0 405 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 MDH1BQ5I0G3 518 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 PAGE2BQ5JRK9 111 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TOR1AIP1Q5JTV8 583 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ATAD3CQ5T2N8 411 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 LDLRAD1Q5T700 205 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 GRTP1Q5TC63 336 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 CACHD1Q5VU97 1274 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 UBE2UQ5VVX9 321 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ARSKQ6UWY0 536 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 RANBP10Q6VN20 620 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 NAPRTQ6XQN6 538 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 MACC1Q6ZN28 852 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ZNF704Q6ZNC4 412 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ZNF600Q6ZNG1 722 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 BBS12Q6ZW61 710 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 KRT77Q7Z794 578 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 STRA8Q7Z7C7 330 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 DHFR2Q86XF0 187 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 RHPN2Q8IUC4 686 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 CDH26Q8IXH8 852 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 RBFAQ8N0V3 343 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 UBE2J2Q8N2K1 259 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 STX19Q8N4C7 294 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TMEM199Q8N511 208 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 SLC44A5Q8NCS7 719 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 MCUQ8NE86 351 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TRPV3Q8NET8 790 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 OR10T2Q8NGX3 314 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 SLC35B2Q8TB61 432 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 FANK1Q8TC84 345 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 DYNC2LI1Q8TCX1 351 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TSPEARQ8WU66 669 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 RSAD2Q8WXG1 361 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 SHC3Q92529 594 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 MYDGFQ969H8 173 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ZNF566Q969W8 418 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ATP6V1E2Q96A05 226 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 SGK3Q96BR1 496 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 INTS12Q96CB8 462 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 CHFRQ96EP1 664 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TOE1Q96GM8 510 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 AHCYL2Q96HN2 611 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ZSWIM3Q96MP5 696 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 UROC1Q96N76 676 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 LENG8Q96PV6 779 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 GDF15Q99988 308 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 HOPXQ9BPY8 73 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 KCTD14Q9BQ13 255 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 EBF4Q9BQW3 602 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TARS2Q9BW92 718 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 FUNDC2Q9BWH2 189 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 APOL6Q9BWW8 343 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 GTPBP2Q9BX10 602 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 FTHL17Q9BXU8 183 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ING2Q9H160 280 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 DSN1Q9H410 356 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 C8orf33Q9H7E9 229 aaPredicted RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TMEM206Q9H813 350 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ZBTB26Q9HCK0 441 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 NGRNQ9NPE2 291 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 SPAG4Q9NPE6 437 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TIGARQ9NQ88 270 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 CYP26B1Q9NR63 512 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TBC1D13Q9NVG8 400 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TMEM45AQ9NWC5 275 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ASNSD1Q9NWL6 643 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ING3Q9NXR8 418 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 GLTPQ9NZD2 209 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 MARCH2Q9P0N8 246 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 WARS2Q9UGM6 360 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ZNF639Q9UID6 485 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 NOCTQ9UK39 431 aaKnown RBP4.65□□□□□ -1.67
PTCD3-212ENST00000477520 TLK1Q9UKI8 766 aa4.65□□□□□ -1.67
PTCD3-212ENST00000477520 ADAM28Q9UKQ2 775 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms