RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-208	ENST00000477447	DPAGT1	Q9H3H5	408 aa		3.13	□□□□□ -1.91
TARDBP-208	ENST00000477447	SDF2L1	Q9HCN8	221 aa		3.13	□□□□□ -1.91
TARDBP-208	ENST00000477447	FAM118A	Q9NWS6	357 aa		3.13	□□□□□ -1.91
TARDBP-208	ENST00000477447	OSER1	Q9NX31	292 aa		3.13	□□□□□ -1.91
TARDBP-208	ENST00000477447	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	3.13	□□□□□ -1.91
TARDBP-208	ENST00000477447	PASK	Q96RG2	1323 aa		3.13	□□□□□ -1.91
TARDBP-208	ENST00000477447	MED19	A0JLT2	244 aa	Predicted RBP	3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	ELOVL7	A1L3X0	281 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	IPO8	O15397	1037 aa	Known RBP	3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	P4HA2	O15460	535 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	XRCC3	O43542	346 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	PRKN	O60260	465 aa	Predicted RBP	3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	PRSS1	P07477	247 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	GNAZ	P19086	355 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	MSH3	P20585	1137 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	EPHA2	P29317	976 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	KRT20	P35900	424 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	THOP1	P52888	689 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	CDH13	P55290	713 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	RPS18	P62269	152 aa	Known RBP	3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	CDK3	Q00526	305 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	CALD1	Q05682	793 aa	Known RBP	3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	PNRC1	Q12796	327 aa	Predicted RBP	3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	SNAPC1	Q16533	368 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	MEX3B	Q6ZN04	569 aa	Known RBP	3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	PRPF39	Q86UA1	669 aa	Known RBP	3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	CCDC89	Q8N998	374 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	MS4A10	Q96PG2	267 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	NEK1	Q96PY6	1258 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	OLFM1	Q99784	485 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	PSD2	Q9BQI7	771 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	CCDC106	Q9BWC9	280 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	SLC35C2	Q9NQQ7	365 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	OLFML3	Q9NRN5	406 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	TAB2	Q9NYJ8	693 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	MORF4L1	Q9UBU8	362 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	GRIP1	Q9Y3R0	1128 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	TRPV2	Q9Y5S1	764 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	ASTN2	O75129	1339 aa	Predicted RBP	3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447	NOTCH4	Q99466	2003 aa		3.12	□□□□□ -1.91
TARDBP-208	ENST00000477447		A0A087WYN8	130 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447		A0A0B4J293	547 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	HEPACAM2	A8MVW5	462 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	ADRB2	P07550	413 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	IL11	P20809	199 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	NR2C2	P49116	596 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	UBXN2A	P68543	259 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	NUCB1	Q02818	461 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	DMP1	Q13316	513 aa	Predicted RBP	3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	IL11RA	Q14626	422 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	NR1D2	Q14995	579 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	TMEM266	Q2M3C6	531 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	LETM2	Q2VYF4	491 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	WDR38	Q5JTN6	314 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	CCNYL2	Q5T2Q4	361 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	TMPRSS11F	Q6ZWK6	438 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	USP43	Q70EL4	1123 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	DGLUCY	Q7Z3D6	616 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	GPALPP1	Q8IXQ4	340 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	POMGNT2	Q8NAT1	580 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	POGLUT1	Q8NBL1	392 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	PAPD5	Q8NDF8	572 aa	Known RBP	3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	KLHDC9	Q8NEP7	349 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	OR2T12	Q8NG77	320 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	DNASE2B	Q8WZ79	361 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	TM9SF4	Q92544	642 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	TRAF4	Q9BUZ4	470 aa	Predicted RBP	3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	GOLPH3L	Q9H4A5	285 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	BICC1	Q9H694	974 aa	Known RBP	3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	ACKR4	Q9NPB9	350 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	CRNN	Q9UBG3	495 aa	Predicted RBP	3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447	TTLL3	Q9Y4R7	772 aa		3.11	□□□□□ -1.91
TARDBP-208	ENST00000477447		A0A1W2PRB8	838 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	HYKK	A2RU49	373 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	SYNDIG1L	A6NDD5	238 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	ANKUB1	A6NFN9	424 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	OR6C76	A6NM76	312 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	CIDEA	O60543	219 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	TSPAN1	O60635	241 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	MED24	O75448	989 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	CSPG5	O95196	566 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	TRUB2	O95900	331 aa	Known RBP	3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	IGKV3-20	P01619	116 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	DCT	P40126	519 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	TPD52	P55327	224 aa	Predicted RBP	3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	LINC01547	P58512	204 aa	Predicted RBP	3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	PRPF4B	Q13523	1007 aa	Known RBP	3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	CBWD6	Q4V339	395 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	TECRL	Q5HYJ1	363 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	CBWD3	Q5JTY5	395 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	C9orf50	Q5SZB4	431 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	ERMARD	Q5T6L9	678 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	GRTP1	Q5TC63	336 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	C6orf163	Q5TEZ5	329 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	NAA16	Q6N069	864 aa	Predicted RBP	3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	SLC30A6	Q6NXT4	461 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	MARK2	Q7KZI7	788 aa	Known RBP	3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	CAMKMT	Q7Z624	323 aa		3.1	□□□□□ -1.91
TARDBP-208	ENST00000477447	ZNF329	Q86UD4	541 aa		3.1	□□□□□ -1.91

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