RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 EIF4A1P60842 406 aaKnown RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 GSTO1P78417 241 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 GALK2Q01415 458 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 DSC2Q02487 901 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 DLG1Q12959 904 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 CSTF3Q12996 717 aaKnown RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 NAB1Q13506 487 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 KCNJ12Q14500 433 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 HERC3Q15034 1050 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 RPS6KA1Q15418 735 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 TAF5Q15542 800 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 PDK4Q16654 411 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 SLC9C1Q4G0N8 1177 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 AASDHQ4L235 1098 aaPredicted RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 TAF1BQ53T94 588 aaPredicted RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 SFT2D3Q587I9 215 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 BRDTQ58F21 947 aaPredicted RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 RARS2Q5T160 578 aaKnown RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 UBAP2Q5T6F2 1119 aaKnown RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 GRTP1Q5TC63 336 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 FAM109BQ6ICB4 259 aaPredicted RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 ZFP1Q6P2D0 407 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 CCDC137Q6PK04 289 aaKnown RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 VSTM1Q6UX27 236 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 ZNF767PQ75MW2 155 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 HORMAD1Q86X24 394 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 HERC6Q8IVU3 1022 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 RASGEF1CQ8N431 466 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 ZNF565Q8N9K5 539 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 TEX19Q8NA77 164 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 OR52K2Q8NGK3 314 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 OR6S1Q8NH40 331 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 GANCQ8TET4 914 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 GDPD5Q8WTR4 605 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 JPH3Q8WXH2 748 aaPredicted RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 ATG4AQ8WYN0 398 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 SYN2Q92777 582 aaPredicted RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 CELF1Q92879 486 aaKnown RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 MYDGFQ969H8 173 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 NCLNQ969V3 563 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 ISOC1Q96CN7 298 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 R3HDM4Q96D70 268 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 C18orf8Q96DM3 657 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 ERLEC1Q96DZ1 483 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 AK8Q96MA6 479 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 CAMK1GQ96NX5 476 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 TRAF4Q9BUZ4 470 aaPredicted RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 KIFC3Q9BVG8 833 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 KIFC1Q9BW19 673 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 TEX13BQ9BXU2 312 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 SLC2A11Q9BYW1 496 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 USP44Q9H0E7 712 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 SIK2Q9H0K1 926 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 LHX5Q9H2C1 402 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 TMEM245Q9H330 911 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 ATP13A3Q9H7F0 1226 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 ERVMER34-1Q9H9K5 563 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 NTN4Q9HB63 628 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 TUFT1Q9NNX1 390 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 FBXO28Q9NVF7 368 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 DNAJC17Q9NVM6 304 aaKnown RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 GGA3Q9NZ52 723 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 KCND2Q9NZV8 630 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 LRWD1Q9UFC0 647 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 DBNLQ9UJU6 430 aaKnown RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 PHTF1Q9UMS5 762 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 CAB39Q9Y376 341 aaPredicted RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 CBY1Q9Y3M2 126 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 SNX5Q9Y5X3 404 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 ZCCHC11Q5TAX3 1644 aaKnown RBP4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 PSME4Q14997 1843 aa4.41□□□□□ -1.7
PIKFYVE-209ENST00000477200 TDRD9Q8NDG6 1382 aaKnown RBP4.4□□□□□ -1.7
PIKFYVE-209ENST00000477200 MYH2Q9UKX2 1941 aa4.4□□□□□ -1.7
PIKFYVE-209ENST00000477200 VWDEQ8N2E2 1590 aa4.4□□□□□ -1.7
PIKFYVE-209ENST00000477200 A0A1B0GWJ7 208 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 A0A1W2PQ72 361 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 ZSCAN5CA6NGD5 496 aaPredicted RBP4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 FAM47DPA6NHR8 397 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 ZNF98A6NK75 572 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 TSPY2A6NKD2 308 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 H3BUI4 141 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 M0QYG6 137 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 PLK4O00444 970 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 IFRD1O00458 451 aaPredicted RBP4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 PODXLO00592 558 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 TXNDC9O14530 226 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 TNPO2O14787 897 aaKnown RBP4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 DCLK1O15075 740 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 ZBTB14O43829 449 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 CCNT2O60583 730 aaKnown RBP4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 ATG13O75143 517 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 PTP4A3O75365 173 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 CLN5O75503 358 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 CLPXO76031 633 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 SLITRK3O94933 977 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 MOCS3O95396 460 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 CTDNEP1O95476 244 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 H6PDO95479 791 aa4.4□□□□□ -1.71
PIKFYVE-209ENST00000477200 CBX6O95503 412 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms