RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 CFAP36Q96G28 342 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 SNF8Q96H20 258 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 CRELD1Q96HD1 420 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 EBNA1BP2Q99848 306 aaKnown RBP12.14□□□□□ -0.47
APTX-220ENST00000476858 XKR8Q9H6D3 395 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 CCDC86Q9H6F5 360 aaKnown RBP12.14□□□□□ -0.47
APTX-220ENST00000476858 OCIAD1Q9NX40 245 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 RNF14Q9UBS8 474 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 CDC23Q9UJX2 597 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 PLAGL1Q9UM63 463 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 CRYL1Q9Y2S2 319 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 AK5Q9Y6K8 562 aa12.14□□□□□ -0.47
APTX-220ENST00000476858 TPRP12270 2363 aaKnown RBP12.14□□□□□ -0.47
APTX-220ENST00000476858 C17orf113A0A1B0GUU1 675 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 UBA6A0AVT1 1052 aaPredicted RBP12.13□□□□□ -0.47
APTX-220ENST00000476858 ESYT3A0FGR9 886 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 OR5K4A6NMS3 321 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 UBXN7O94888 489 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 SLC35G4P0C7Q5 338 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 THRAP10827 490 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 ACADLP28330 430 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 GABRB3P28472 473 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 PPM1FP49593 454 aaPredicted RBP12.13□□□□□ -0.47
APTX-220ENST00000476858 LIMK2P53671 638 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 SARNPP82979 210 aaKnown RBP12.13□□□□□ -0.47
APTX-220ENST00000476858 TIAL1Q01085 375 aaKnown RBP eCLIP12.13□□□□□ -0.47
APTX-220ENST00000476858 PRKG2Q13237 762 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 SQSTM1Q13501 440 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 COL9A2Q14055 689 aaPredicted RBP12.13□□□□□ -0.47
APTX-220ENST00000476858 MORF4L2Q15014 288 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 HSP90AA5PQ58FG0 334 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 ZNF470Q6ECI4 717 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 CNSTQ6PJW8 725 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 ZDHHC24Q6UX98 284 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 UNC5AQ6ZN44 842 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 SYDE1Q6ZW31 735 aaPredicted RBP12.13□□□□□ -0.47
APTX-220ENST00000476858 RAB11FIP2Q7L804 512 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 PROSER1Q86XN7 944 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 CILP2Q8IUL8 1156 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 GIMAP7Q8NHV1 300 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 HEXDCQ8WVB3 486 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 LIN37Q96GY3 246 aaPredicted RBP12.13□□□□□ -0.47
APTX-220ENST00000476858 ERP44Q9BS26 406 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 LRRC1Q9BTT6 524 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 NRSN2Q9GZP1 204 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 POLR1BQ9H9Y6 1135 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 IARS2Q9NSE4 1012 aaKnown RBP12.13□□□□□ -0.47
APTX-220ENST00000476858 C20orf96Q9NUD7 363 aaPredicted RBP12.13□□□□□ -0.47
APTX-220ENST00000476858 POT1Q9NUX5 634 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 SAMD15Q9P1V8 674 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 PISDQ9UG56 409 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 SLC24A2Q9UI40 661 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 ANAPC5Q9UJX4 755 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 ACSL5Q9ULC5 683 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 LOXL2Q9Y4K0 774 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 TEX264Q9Y6I9 313 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 FAM169AQ9Y6X4 670 aa12.13□□□□□ -0.47
APTX-220ENST00000476858 KMT2BQ9UMN6 2715 aaPredicted RBP12.12□□□□□ -0.47
APTX-220ENST00000476858 ADAMTS20P59510 1910 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 CCDC187A0A096LP49 1063 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 SRRM3A6NNA2 597 aaPredicted RBP12.12□□□□□ -0.47
APTX-220ENST00000476858 AP3B1O00203 1094 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 PRMT5O14744 637 aaPredicted RBP12.12□□□□□ -0.47
APTX-220ENST00000476858 KCNJ13O60928 360 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 NDUFS3O75489 264 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 USP1O94782 785 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 HAUS5O94927 633 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 TNFSF15O95150 251 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 OR56A5P0C7T3 313 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 FGF3P11487 239 aaPredicted RBP12.12□□□□□ -0.47
APTX-220ENST00000476858 SLC2A4P14672 509 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 PGAM1P18669 254 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 AOAHP28039 575 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 HALP42357 657 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 LSSP48449 732 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 CCSMST1Q4G0I0 132 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 LYPLAL1Q5VWZ2 237 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 TMEM71Q6P5X7 295 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 FAM92BQ6ZTR7 304 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 ARHGAP22Q7Z5H3 698 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 PDZD3Q86UT5 571 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 ACVR1CQ8NER5 493 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 OR4D9Q8NGE8 314 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 OR10G6Q8NH81 332 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 WDR48Q8TAF3 677 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.12□□□□□ -0.47
APTX-220ENST00000476858 NXPE2Q96DL1 559 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 NAF1Q96HR8 494 aaKnown RBP12.12□□□□□ -0.47
APTX-220ENST00000476858 TGM7Q96PF1 710 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 FERD3LQ96RJ6 166 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 HGH1Q9BTY7 390 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 UCK1Q9HA47 277 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 FOXJ2Q9P0K8 574 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 PDP2Q9P2J9 529 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 MRFAP1Q9Y605 127 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 NFS1Q9Y697 457 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 LAMA5O15230 3695 aa12.12□□□□□ -0.47
APTX-220ENST00000476858 KNTC1P50748 2209 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 OR6C74A6NCV1 312 aa12.11□□□□□ -0.47
APTX-220ENST00000476858 FAM187AA6NFU0 413 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms