RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 RAD51BO15315 384 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 DYRK3O43781 588 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 SCO2O43819 266 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 ALBP02768 609 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 HSD17B1P14061 328 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 IL12AP29459 219 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 RFC2P35250 354 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 CASP2P42575 452 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 CRYBB1P53674 252 aaPredicted RBP8.26□□□□□ -1.09
VAPB-205ENST00000476395 SLC10A7Q0GE19 358 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 SOWAHCQ53LP3 525 aaPredicted RBP8.26□□□□□ -1.09
VAPB-205ENST00000476395 FBXO48Q5FWF7 155 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 LCN8Q6JVE9 175 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 TERB1Q8NA31 727 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 LEMD2Q8NC56 503 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 OR6Q1Q8NGQ2 317 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 OR2T11Q8NH01 316 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 BRI3BPQ8WY22 251 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 TMEM125Q96AQ2 219 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 C19orf60Q96EN9 201 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 SLC10A4Q96EP9 437 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 FCRL2Q96LA5 508 aaPredicted RBP8.26□□□□□ -1.09
VAPB-205ENST00000476395 RNF145Q96MT1 663 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 DACH2Q96NX9 599 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 RUBCNLQ9H714 662 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 NMRK2Q9NPI5 230 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 GALPQ9UBC7 116 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 PFDN2Q9UHV9 154 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 ARL5CA6NH57 179 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 WASH4PA8MWX3 477 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 KMOO15229 486 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 CNTN5O94779 1100 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 SEC24AO95486 1093 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 FGF4P08620 206 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 IFI30P13284 250 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 GFAPP14136 432 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 PRKACGP22612 351 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 EIF2DP41214 584 aaKnown RBP8.26□□□□□ -1.09
VAPB-205ENST00000476395 ATP6V0D1P61421 351 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 HERVK_113P63132 956 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 MRPS15P82914 257 aaKnown RBP8.26□□□□□ -1.09
VAPB-205ENST00000476395 PLIN5Q00G26 463 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 STX5Q13190 355 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 ALFQ53S48 1182 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 PAGE3Q5JUK9 113 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 TTC23LQ6PF05 361 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 CYP20A1Q6UW02 462 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 FKBP9P1Q75LS8 142 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 ELMOD2Q8IZ81 293 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 MINDY1Q8N5J2 469 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 TEX26Q8N6G2 289 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 PAPD5Q8NDF8 572 aaKnown RBP8.26□□□□□ -1.09
VAPB-205ENST00000476395 PPHLN1Q8NEY8 458 aaKnown RBP8.26□□□□□ -1.09
VAPB-205ENST00000476395 BRSK1Q8TDC3 778 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 SMARCD1Q96GM5 515 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 TUBA1CQ9BQE3 449 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 CHID1Q9BWS9 393 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 ERVK-6Q9BXR3 956 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 TNKS2Q9H2K2 1166 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 CARS2Q9HA77 564 aaKnown RBP8.26□□□□□ -1.09
VAPB-205ENST00000476395 SDR39U1Q9NRG7 319 aaPredicted RBP8.26□□□□□ -1.09
VAPB-205ENST00000476395 GIMAP4Q9NUV9 329 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 PAQR5Q9NXK6 330 aaPredicted RBP8.26□□□□□ -1.09
VAPB-205ENST00000476395 CDH9Q9ULB4 789 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 TESMINQ9Y4I5 508 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 GPR45Q9Y5Y3 372 aa8.26□□□□□ -1.09
VAPB-205ENST00000476395 A0A0J9YYE9 177 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 LOC285095A0A1B0GVY8 99 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 MYADML2A6NDP7 307 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 E9PAM4 449 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 PIP5K1BO14986 540 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 F9P00740 461 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 DNTTP04053 509 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 IL10P22301 178 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 DIO3P55073 304 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 BEX3Q00994 111 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 DSC2Q02487 901 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 HIST2H2ACQ16777 129 aaPredicted RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 UGP2Q16851 508 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 SIRPB2Q5JXA9 342 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 PDZD4Q76G19 769 aaPredicted RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 BEND5Q7L4P6 421 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 STK32CQ86UX6 486 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 SYTL1Q8IYJ3 562 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 FAM86B1Q8N7N1 296 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 ASCC1Q8N9N2 400 aaKnown RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 SLC39A13Q96H72 371 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 KLHL5Q96PQ7 755 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 AMBRA1Q9C0C7 1298 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 B3GNT4Q9C0J1 378 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 SIK2Q9H0K1 926 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 RNF167Q9H6Y7 350 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 ENTPD7Q9NQZ7 604 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 RBM22Q9NW64 420 aaKnown RBP eCLIP8.25□□□□□ -1.09
VAPB-205ENST00000476395 CASTOR2A6NHX0 329 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 NDUFS2O75306 463 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 CHRNA1P02708 482 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 JUNBP17275 347 aaPredicted RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 CBLP22681 906 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 MLLT3P42568 568 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms