RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 CORO1AP31146 461 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 MAGEA10P43363 369 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SLC11A2P49281 568 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 STK19P49842 368 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SELPLGQ14242 412 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 ZNF423Q2M1K9 1284 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 RFX4Q33E94 735 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 NHSL2Q5HYW2 709 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 COLEC12Q5KU26 742 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 RSBN1Q5VWQ0 802 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 AAGABQ6PD74 315 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 UGT2A3Q6UWM9 527 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 VN1R5Q7Z5H4 357 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 VTCN1Q7Z7D3 282 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 ZNF410Q86VK4 478 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SYT12Q8IV01 421 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 PIANPQ8IYJ0 282 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SLC7A5P1Q8MH63 180 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 C8orf59Q8N0T1 100 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 OR56A4Q8NGH8 313 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SLC22A17Q8WUG5 538 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 FAR1Q8WVX9 515 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SLC30A3Q99726 388 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 RHNO1Q9BSD3 238 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 WRAP53Q9BUR4 548 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 MRPS26Q9BYN8 205 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 ADAMTS10Q9H324 1103 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 PDP1Q9P0J1 537 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 VTI1BQ9UEU0 232 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 EIF3LQ9Y262 564 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 RNF11Q9Y3C5 154 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 PCDHB5Q9Y5E4 795 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 LAMA5O15230 3695 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 MAGEB16A2A368 324 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 DCLK1O15075 740 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 NCAM2O15394 837 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 CLDN7O95471 211 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 DNTTP04053 509 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 ALDH2P05091 517 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 ALDOCP09972 364 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 IFI30P13284 250 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 S100A3P33764 101 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 HPCAP84074 193 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SMARCB1Q12824 385 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 CBX3Q13185 183 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 INTS6LQ5JSJ4 861 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 TJAP1Q5JTD0 557 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 CLLU1OSQ5K130 101 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 PIK3R6Q5UE93 754 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 CACHD1Q5VU97 1274 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 TIGD7Q6NT04 549 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 CES5AQ6NT32 575 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 TAF2Q6P1X5 1199 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SERINC5Q86VE9 423 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SLC15A3Q8IY34 581 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SIX5Q8N196 739 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 STK40Q8N2I9 435 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 FAM86B1Q8N7N1 296 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SCAMP4Q969E2 229 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 EGLN2Q96KS0 407 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 KCNC2Q96PR1 638 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 GPR22Q99680 433 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 EQTNQ9NQ60 294 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 COQ3Q9NZJ6 369 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 C5AR2Q9P296 337 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 DMTF1Q9Y222 760 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 MRPS7Q9Y2R9 242 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SH3BP1Q9Y3L3 701 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 GMPPBQ9Y5P6 360 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 ZNF646O15015 1829 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 RLFQ13129 1914 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 MGAT4DA6NG13 374 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 K7EPI3 171 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 FBP2O00757 339 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 UBFD1O14562 309 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 MATN3O15232 486 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 PMM2O15305 246 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SEC24AO95486 1093 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SELPP16109 830 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 CDH5P33151 784 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 CTNNB1P35222 781 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 CHI3L1P36222 383 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 RGS4P49798 205 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 INCA1Q0VD86 236 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 GPNMBQ14956 572 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 TGFBIQ15582 683 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 VARS2Q5ST30 1063 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 MFSD4BQ5TF39 518 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 OR4F3Q6IEY1 312 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 ZFP1Q6P2D0 407 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 POTEHQ6S545 545 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 RFLNAQ6ZTI6 216 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 R3HCC1LQ7Z5L2 792 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 KBTBD6Q86V97 674 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 TRAPPC5Q8IUR0 188 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 DCP1BQ8IZD4 617 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 GTF3C2Q8WUA4 911 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 BCL7CQ8WUZ0 217 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 CDKN2AIPNLQ96HQ2 116 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 ZFRQ96KR1 1074 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms