RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 CBX8Q9HC52 389 aa14.04□□□□□ -0.16
CSNK2B-207ENST00000475875 IFT80Q9P2H3 777 aaPredicted RBP14.04□□□□□ -0.16
CSNK2B-207ENST00000475875 SEC14L3Q9UDX4 400 aa14.04□□□□□ -0.16
CSNK2B-207ENST00000475875 AMACRQ9UHK6 382 aa14.04□□□□□ -0.16
CSNK2B-207ENST00000475875 FBXL4Q9UKA2 621 aa14.04□□□□□ -0.16
CSNK2B-207ENST00000475875 TRAV17A0A0B4J275 112 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 OR6C74A6NCV1 312 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 CRYABP02511 175 aaKnown RBP14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 ESRRAP11474 423 aaPredicted RBP14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 CSNK1G2P78368 415 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 PLEKHA7Q6IQ23 1121 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 DCUN1D2Q6PH85 259 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 TMCO3Q6UWJ1 677 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 AMZ2Q86W34 360 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 TRAPPC5Q8IUR0 188 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 LPCAT1Q8NF37 534 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 OR1N1Q8NGS0 311 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 VPS50Q96JG6 964 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 PCDH9Q9HC56 1237 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 GPAMQ9HCL2 828 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 DTLQ9NZJ0 730 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 CWC15Q9P013 229 aaKnown RBP14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 DOCK10Q96BY6 2186 aa14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 NSD1Q96L73 2696 aaPredicted RBP14.03□□□□□ -0.16
CSNK2B-207ENST00000475875 JMJD1CQ15652 2540 aa14.02□□□□□ -0.16
CSNK2B-207ENST00000475875 PES1O00541 588 aaKnown RBP14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 PRPSAP2O60256 369 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 PMPCBO75439 489 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 CBSLP0DN79 551 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 EEF1GP26641 437 aaKnown RBP14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 SERPINB6P35237 376 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 CBSP35520 551 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 ITKQ08881 620 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 GTF2H3Q13889 308 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 IQCB1Q15051 598 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 CLEC16AQ2KHT3 1053 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 TCP11X2Q5H9J9 407 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 FAAH2Q6GMR7 532 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 FBXO38Q6PIJ6 1188 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 MEX3BQ6ZN04 569 aaKnown RBP14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 LUZP1Q86V48 1076 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 BRSK1Q8TDC3 778 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 NINJ1Q92982 152 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 PPM1MQ96MI6 270 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 VPS35Q96QK1 796 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 TUBGCP2Q9BSJ2 902 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 PITPNM3Q9BZ71 974 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 KIR3DX1Q9H7L2 352 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 ZFYVE1Q9HBF4 777 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 TNFRSF10DQ9UBN6 386 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 SLC24A2Q9UI40 661 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 PCDHGB6Q9Y5F9 930 aa14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 DNMT3AQ9Y6K1 912 aaPredicted RBP14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 PRRC2AP48634 2157 aaKnown RBP14.02□□□□□ -0.17
CSNK2B-207ENST00000475875 CSPG4Q6UVK1 2322 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 ANKRD66B4E2M5 251 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 H3BRJ5 948 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 ATMINO43313 823 aaPredicted RBP14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 SLC19A2O60779 497 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 CNOT3O75175 753 aaKnown RBP14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 GFPT2O94808 682 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 ATP1A3P13637 1013 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 HLA-DPA1P20036 260 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 OGDHQ02218 1023 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 TMEM115Q12893 351 aaPredicted RBP14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 XRCC4Q13426 336 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 IHHQ14623 411 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 QPCTQ16769 361 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 VWA3BQ502W6 1294 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 ALS2CLQ60I27 953 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 TAOK1Q7L7X3 1001 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 BEND7Q8N7W2 519 aaPredicted RBP14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 GPR26Q8NDV2 337 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 CATSPER1Q8NEC5 780 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 SPATA3Q8NHX4 192 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 CPLX3Q8WVH0 158 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 EID2BQ96D98 161 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 PEBP4Q96S96 227 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 PCDHB18PQ96TA0 734 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 MRM3Q9HC36 420 aaKnown RBP14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 DLL4Q9NR61 685 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 IMP3Q9NV31 184 aaKnown RBP14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 SH3BGRL2Q9UJC5 107 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 ANKRD12Q6UB98 2062 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 FLNAP21333 2647 aaKnown RBP14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 NUP210LQ5VU65 1888 aa14.01□□□□□ -0.17
CSNK2B-207ENST00000475875 DYTNA2CJ06 578 aa14□□□□□ -0.17
CSNK2B-207ENST00000475875 DDX3YO15523 660 aaKnown RBP14□□□□□ -0.17
CSNK2B-207ENST00000475875 MTX2O75431 263 aa14□□□□□ -0.17
CSNK2B-207ENST00000475875 POLR2CP19387 275 aaPredicted RBP14□□□□□ -0.17
CSNK2B-207ENST00000475875 NDUFS1P28331 727 aa14□□□□□ -0.17
CSNK2B-207ENST00000475875 DNAJA1P31689 397 aaKnown RBP14□□□□□ -0.17
CSNK2B-207ENST00000475875 TNFSF10P50591 281 aa14□□□□□ -0.17
CSNK2B-207ENST00000475875 ARG2P78540 354 aa14□□□□□ -0.17
CSNK2B-207ENST00000475875 GALNT3Q14435 633 aa14□□□□□ -0.17
CSNK2B-207ENST00000475875 CDSNQ15517 529 aa14□□□□□ -0.17
CSNK2B-207ENST00000475875 NKAIN1Q4KMZ8 207 aa14□□□□□ -0.17
CSNK2B-207ENST00000475875 FILIP1LQ4L180 1135 aa14□□□□□ -0.17
CSNK2B-207ENST00000475875 KHDC1Q4VXA5 237 aaKnown RBP14□□□□□ -0.17
CSNK2B-207ENST00000475875 CDKAL1Q5VV42 579 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms