RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 TBC1D24Q9ULP9 559 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 FAM240BA0A1B0GVZ2 78 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 ZNF432O94892 652 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 LBX2Q6XYB7 198 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 ARL10Q8N8L6 244 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 PIWIL1Q96J94 861 aaKnown RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 SNX27Q96L92 541 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 DNAJC5Q9H3Z4 198 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 MYO18AQ92614 2054 aaKnown RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 GJA1P17302 382 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 PRKCZQ05513 592 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 NIFKQ9BYG3 293 aaKnown RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 PNO1Q9NRX1 252 aaKnown RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 TRPS1Q9UHF7 1281 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 MAFBQ9Y5Q3 323 aaPredicted RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 DCCP43146 1447 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 AGLP35573 1532 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 CHD4Q14839 1912 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 OR51F1A6NGY5 319 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 A8MUA0 341 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 PSMA1P25786 263 aaKnown RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 AVPR1BP47901 424 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 DNASE1L1P49184 302 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 GRSF1Q12849 480 aaKnown RBP eCLIP10.82□□□□□ -0.68
VAPB-204ENST00000475243 ILF3Q12906 894 aaKnown RBP eCLIP10.82□□□□□ -0.68
VAPB-204ENST00000475243 CCSAPQ6IQ19 270 aaPredicted RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 YTHDF3Q7Z739 585 aaKnown RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 CHERPQ8IWX8 916 aaKnown RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 LRTOMTQ8WZ04 291 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 TRMT61BQ9BVS5 477 aaKnown RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 CHMP1AQ9HD42 196 aaPredicted RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 SLC17A6Q9P2U8 582 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 MTRRQ9UBK8 725 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 CFAP20Q9Y6A4 193 aaKnown RBP10.82□□□□□ -0.68
VAPB-204ENST00000475243 DLG5Q8TDM6 1919 aa10.82□□□□□ -0.68
VAPB-204ENST00000475243 SOWAHBA6NEL2 793 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 UGT1A9O60656 530 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 NME6O75414 186 aaPredicted RBP10.81□□□□□ -0.68
VAPB-204ENST00000475243 TM7SF2O76062 418 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 INHAP05111 366 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 HOXC12P31275 282 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 RPS6KA3P51812 740 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 SLC10A6Q3KNW5 377 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 FAM174BQ3ZCQ3 159 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 OR10H4Q8NGA5 316 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 CAPNS2Q96L46 248 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 GFM1Q96RP9 751 aaKnown RBP10.81□□□□□ -0.68
VAPB-204ENST00000475243 DHX33Q9H6R0 707 aaKnown RBP10.81□□□□□ -0.68
VAPB-204ENST00000475243 UGT1A7Q9HAW7 530 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 UGT1A10Q9HAW8 530 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 UGT1A8Q9HAW9 530 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 ERVK-11Q9UQG0 969 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 ANGPTL1O95841 491 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 FAUP35544 74 aaKnown RBP10.81□□□□□ -0.68
VAPB-204ENST00000475243 MTPNP58546 118 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 YBEYP58557 167 aaPredicted RBP10.81□□□□□ -0.68
VAPB-204ENST00000475243 OLR1P78380 273 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 ZNF613Q6PF04 617 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 IQCHQ86VS3 1027 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 TBX5Q99593 518 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 NUDT4Q9NZJ9 180 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 RBMX2Q9Y388 322 aaKnown RBP10.81□□□□□ -0.68
VAPB-204ENST00000475243 E7ENX8 843 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 HNRNPH3P31942 346 aaKnown RBP10.81□□□□□ -0.68
VAPB-204ENST00000475243 CSKP41240 450 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 IDH3AP50213 366 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 GALK1P51570 392 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 IRF9Q00978 393 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 DPYSQ14117 519 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 DBF4BQ8NFT6 615 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 KCND1Q9NSA2 647 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 RCOR3Q9P2K3 495 aaPredicted RBP10.81□□□□□ -0.68
VAPB-204ENST00000475243 ERVW-1Q9UQF0 538 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 IFNW1P05000 195 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 CHRNA4P43681 627 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 DGKGP49619 791 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 HSF2Q03933 536 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 HEPACAMQ14CZ8 416 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 TSTD2Q5T7W7 516 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 OGFOD2Q6N063 350 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 TNFAIP8L2Q6P589 184 aaPredicted RBP10.81□□□□□ -0.68
VAPB-204ENST00000475243 COX18Q8N8Q8 333 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 C11orf65Q8NCR3 313 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 PYCR2Q96C36 320 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 DIRAS2Q96HU8 199 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 MAGEH1Q9H213 219 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 MRPS30Q9NP92 439 aaKnown RBP10.81□□□□□ -0.68
VAPB-204ENST00000475243 SALL4Q9UJQ4 1053 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 PCDHGC3Q9UN70 934 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 TGFB1P01137 390 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 COL6A2P12110 1019 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 L1CAMP32004 1257 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 LAPTM5Q13571 262 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 NLGN2Q8NFZ4 835 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 OR5T3Q8NGG3 340 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 IRGQQ8WZA9 623 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 CHCHD6Q9BRQ6 235 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 MYH9P35579 1960 aaKnown RBP10.81□□□□□ -0.68
VAPB-204ENST00000475243 FAM172BPA6NC97 362 aa10.81□□□□□ -0.68
VAPB-204ENST00000475243 A8MU76 341 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms