RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 MAGED4Q96JG8 741 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 SPATA13Q96N96 652 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 TAAR9Q96RI9 348 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 CYP2S1Q96SQ9 504 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 METTL9Q9H1A3 318 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 CACYBPQ9HB71 228 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 ZDHHC3Q9NYG2 299 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 STK38LQ9Y2H1 464 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 SNX13Q9Y5W8 968 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 YLPM1P49750 1951 aaKnown RBP4.81□□□□□ -1.64
NPHP3-206ENST00000474871 PASKQ96RG2 1323 aa4.81□□□□□ -1.64
NPHP3-206ENST00000474871 A0A087WV62 115 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF839A8K0R7 811 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 TRIM24O15164 1050 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 GPR182O15218 404 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 DPM1O60762 260 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 GATBO75879 557 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 SERPINA5P05154 406 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 RAB3AP20336 220 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 DDCP20711 480 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 MPIP34949 423 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 MAGEA4P43358 317 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 RAD23AP54725 363 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 WNT7BP56706 349 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 RPL26P61254 145 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 INCA1Q0VD86 236 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 DDX39BQ13838 428 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ZYXQ15942 572 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 NHSL2Q5HYW2 709 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 HP1BP3Q5SSJ5 553 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ANKRD40Q6AI12 368 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 GSTA5Q7RTV2 222 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 TRAPPC11Q7Z392 1133 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 IGFN1Q86VF2 1251 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 IRF2BP1Q8IU81 584 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 LIX1LQ8IVB5 337 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ICA1LQ8NDH6 482 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 SMPDL3AQ92484 453 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 OTUB2Q96DC9 234 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 OSMRQ99650 979 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 MAP3K3Q99759 626 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 MIPEPQ99797 713 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 SNTG1Q9NSN8 517 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 GLTPQ9NZD2 209 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 DNASE2O00115 360 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ADAMTS3O15072 1205 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 MAFKO60675 156 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 DCTN3O75935 186 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 SLC34A2O95436 690 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 IFNA16P05015 189 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 PROS1P07225 676 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 FHP07954 510 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 MMP10P09238 476 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 USP17L8P0C7I0 530 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 PKMP14618 531 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 CYP2B6P20813 491 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ECHS1P30084 290 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 CSKP41240 450 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 TPMTP51580 245 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 SLC5A3P53794 718 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 POLGP54098 1239 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ATXN3P54252 364 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 RAB4BP61018 213 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ERVS71-1P61550 626 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 LCP2Q13094 533 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 FASTKQ14296 549 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 IRF3Q14653 427 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 SLC15A2Q16348 729 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 DENND5AQ6IQ26 1287 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 PYHIN1Q6K0P9 492 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 HEPHL1Q6MZM0 1159 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 KLBQ86Z14 1044 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 PPP1R35Q8TAP8 253 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 TRUB1Q8WWH5 349 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 COPS5Q92905 334 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 EXOSC8Q96B26 276 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ZHX1-C8orf76Q96EF9 292 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 HBEGFQ99075 208 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 SYT17Q9BSW7 474 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ALOXE3Q9BYJ1 711 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ANO3Q9BYT9 981 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF696Q9H7X3 374 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ADARB2Q9NS39 739 aaKnown RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ABCC13Q9NSE7 274 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 CCM2LQ9NUG4 571 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ADPRHL2Q9NX46 363 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 TMEM216Q9P0N5 145 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 CACNG4Q9UBN1 327 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 DNAJC12Q9UKB3 198 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ITGA11Q9UKX5 1188 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 NEU2Q9Y3R4 380 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 PCDHAC2Q9Y5I4 1007 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 NID2Q14112 1375 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 A0A0A6YYK5 440 aaPredicted RBP4.8□□□□□ -1.64
NPHP3-206ENST00000474871 A0A0U1RQK1 487 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 ZNF320A2RRD8 509 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 DUXAA6NLW8 204 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 CES2O00748 559 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 GIPC1O14908 333 aa4.8□□□□□ -1.64
NPHP3-206ENST00000474871 CTNSO60931 367 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms