RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 PBLDP30039 288 aaPredicted RBP16.54■□□□□ 0.24
SCAF11-206ENST00000474828 CLCN7P51798 805 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 EIF3BP55884 814 aaKnown RBP16.54■□□□□ 0.24
SCAF11-206ENST00000474828 TIAL1Q01085 375 aaKnown RBP eCLIP16.54■□□□□ 0.24
SCAF11-206ENST00000474828 CFHR1Q03591 330 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 ZFP36L1Q07352 338 aaKnown RBP16.54■□□□□ 0.24
SCAF11-206ENST00000474828 MGAT5Q09328 741 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 ILF2Q12905 390 aaKnown RBP16.54■□□□□ 0.24
SCAF11-206ENST00000474828 BOP1Q14137 746 aaKnown RBP16.54■□□□□ 0.24
SCAF11-206ENST00000474828 SEPT7Q16181 437 aaKnown RBP16.54■□□□□ 0.24
SCAF11-206ENST00000474828 HES3Q5TGS1 186 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 PTRHD1Q6GMV3 140 aaKnown RBP16.54■□□□□ 0.24
SCAF11-206ENST00000474828 SLC26A11Q86WA9 606 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 RASGRP3Q8IV61 690 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 ELMO1Q92556 727 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 CFAP36Q96G28 342 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 DPYSL5Q9BPU6 564 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 RAB33BQ9H082 229 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 FBXO6Q9NRD1 293 aaPredicted RBP16.54■□□□□ 0.24
SCAF11-206ENST00000474828 PSMD13Q9UNM6 376 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 CRYL1Q9Y2S2 319 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 MSRB2Q9Y3D2 182 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 HEBP2Q9Y5Z4 205 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 CACNA1BQ00975 2339 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 ACACBO00763 2458 aa16.54■□□□□ 0.24
SCAF11-206ENST00000474828 CEP295Q9C0D2 2601 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 TRBV23OR9-2A0A075B6M9 112 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 UBA6A0AVT1 1052 aaPredicted RBP16.53■□□□□ 0.24
SCAF11-206ENST00000474828 FAM159BA6NKW6 160 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 HYAL3O43820 417 aaPredicted RBP16.53■□□□□ 0.24
SCAF11-206ENST00000474828 SPAG6O75602 509 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 CPNE6O95741 557 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 TOP3BO95985 862 aaKnown RBP16.53■□□□□ 0.24
SCAF11-206ENST00000474828 MT-CO3P00414 261 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 VIPP01282 170 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 FMO4P31512 558 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 CCKBRP32239 447 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 PREPP48147 710 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 CARSP49589 748 aaKnown RBP16.53■□□□□ 0.24
SCAF11-206ENST00000474828 OR1D5P58170 312 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 MPP1Q00013 466 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 GPR18Q14330 331 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 CNSTQ6PJW8 725 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 WDR74Q6RFH5 385 aaPredicted RBP16.53■□□□□ 0.24
SCAF11-206ENST00000474828 CEP128Q6ZU80 1094 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 SLITRK4Q8IW52 837 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 KRT222Q8N1A0 295 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 OTUD6BQ8N6M0 293 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 AARSD1Q9BTE6 412 aaKnown RBP16.53■□□□□ 0.24
SCAF11-206ENST00000474828 SCNM1Q9BWG6 230 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 ABCG4Q9H172 646 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 KIR3DX1Q9H7L2 352 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 MVB12BQ9H7P6 319 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 LRRC4CQ9HCJ2 640 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 OGFRQ9NZT2 677 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 EPHA6Q9UF33 1036 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 CLCA2Q9UQC9 943 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 AKAP13Q12802 2813 aa16.53■□□□□ 0.24
SCAF11-206ENST00000474828 PRAMEF33A0A0G2JMD5 474 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 TCRBV9S1A1TA0A576 114 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 EIF3FO00303 357 aaPredicted RBP16.52■□□□□ 0.24
SCAF11-206ENST00000474828 NIPSNAP2O75323 286 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 KRT37O76014 449 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 RPLP0P05388 317 aaKnown RBP16.52■□□□□ 0.24
SCAF11-206ENST00000474828 APOA4P06727 396 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 SSTR1P30872 391 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 FOXC1Q12948 553 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 ISXQ2M1V0 245 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 ZNF574Q6ZN55 896 aaPredicted RBP16.52■□□□□ 0.24
SCAF11-206ENST00000474828 RBM44Q6ZP01 1051 aaKnown RBP16.52■□□□□ 0.24
SCAF11-206ENST00000474828 C3orf62Q6ZUJ4 267 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 TMPRSS9Q7Z410 1059 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 VRK3Q8IV63 474 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 PALM2Q8IXS6 379 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 TFGQ92734 400 aaPredicted RBP16.52■□□□□ 0.24
SCAF11-206ENST00000474828 TMEM159Q96B96 161 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 CXorf40BQ96DE9 158 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 C12orf66Q96MD2 445 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 GFM1Q96RP9 751 aaKnown RBP16.52■□□□□ 0.24
SCAF11-206ENST00000474828 SLC38A3Q99624 504 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 TMEM121BQ9BXQ6 578 aaPredicted RBP16.52■□□□□ 0.24
SCAF11-206ENST00000474828 SMYD2Q9NRG4 433 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 NSMCE4AQ9NXX6 385 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 KCNK4Q9NYG8 393 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 GALPQ9UBC7 116 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 SLC24A2Q9UI40 661 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 KLK13Q9UKR3 277 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 DHRS7Q9Y394 339 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 COLEC10Q9Y6Z7 277 aa16.52■□□□□ 0.24
SCAF11-206ENST00000474828 ASPMQ8IZT6 3477 aa16.52■□□□□ 0.23
SCAF11-206ENST00000474828 EPG5Q9HCE0 2579 aa16.52■□□□□ 0.23
SCAF11-206ENST00000474828 WDFY3Q8IZQ1 3526 aa16.52■□□□□ 0.23
SCAF11-206ENST00000474828 MN1Q10571 1320 aaPredicted RBP16.51■□□□□ 0.23
SCAF11-206ENST00000474828 IFRD1O00458 451 aaPredicted RBP16.51■□□□□ 0.23
SCAF11-206ENST00000474828 MATN4O95460 622 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 C9P02748 559 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 CSF2RBP32927 897 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 TUBB4BP68371 445 aa16.51■□□□□ 0.23
SCAF11-206ENST00000474828 TARDBPQ13148 414 aaKnown RBP eCLIP16.51■□□□□ 0.23
SCAF11-206ENST00000474828 SPIDRQ14159 915 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms