RNA–Protein interactions for RNA: ENST00000474619.1

SEC23B-207, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 5

Gene SEC23B, Length 232 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-207ENST00000474619 SPANXN3Q5MJ09 141 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 PTRHD1Q6GMV3 140 aaKnown RBP12.12□□□□□ -0.47
SEC23B-207ENST00000474619 ARHGAP22Q7Z5H3 698 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 CILP2Q8IUL8 1156 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 OTUD6BQ8N6M0 293 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 AGBL5Q8NDL9 886 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 GABPB2Q8TAK5 448 aaPredicted RBP12.12□□□□□ -0.47
SEC23B-207ENST00000474619 TFGQ92734 400 aaPredicted RBP12.12□□□□□ -0.47
SEC23B-207ENST00000474619 ZNF669Q96BR6 464 aaPredicted RBP12.12□□□□□ -0.47
SEC23B-207ENST00000474619 ZDHHC12Q96GR4 267 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 RMDN2Q96LZ7 410 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 BIRC8Q96P09 236 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 FERD3LQ96RJ6 166 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 TRIM51Q9BSJ1 452 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 TFB2MQ9H5Q4 396 aaKnown RBP12.12□□□□□ -0.47
SEC23B-207ENST00000474619 KIR3DX1Q9H7L2 352 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 LATS2Q9NRM7 1088 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 OGFRQ9NZT2 677 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 WHRNQ9P202 907 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 FAM8A1Q9UBU6 413 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 SLC24A2Q9UI40 661 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 GNPTGQ9UJJ9 305 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 ZMIZ1Q9ULJ6 1067 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 SNX24Q9Y343 169 aa12.12□□□□□ -0.47
SEC23B-207ENST00000474619 GOLGA4Q13439 2230 aaKnown RBP12.11□□□□□ -0.47
SEC23B-207ENST00000474619 ZZEF1O43149 2961 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 ARHGEF17Q96PE2 2063 aaPredicted RBP12.11□□□□□ -0.47
SEC23B-207ENST00000474619 BHMG1C9JSJ3 638 aaPredicted RBP12.11□□□□□ -0.47
SEC23B-207ENST00000474619 NVLO15381 856 aaKnown RBP12.11□□□□□ -0.47
SEC23B-207ENST00000474619 RAD51CO43502 376 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 URI1O94763 535 aaPredicted RBP12.11□□□□□ -0.47
SEC23B-207ENST00000474619 TNFSF15O95150 251 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 S1PR4O95977 384 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 APOA4P06727 396 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 JMJD7P0C870 316 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 TYRP1P17643 537 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 AOAHP28039 575 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 FMO4P31512 558 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 CSTF2P33240 577 aaKnown RBP eCLIP12.11□□□□□ -0.47
SEC23B-207ENST00000474619 MAPK9P45984 424 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 RPL21P46778 160 aaKnown RBP12.11□□□□□ -0.47
SEC23B-207ENST00000474619 CAPZBP47756 277 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 ARL4CP56559 192 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 CALCOCO2Q13137 446 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 HIF1AQ16665 826 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 ST3GAL2Q16842 350 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 WHAMMP3Q1A5X7 153 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 MSS51Q4VC12 460 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 DUPD1Q68J44 220 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 CENPUQ71F23 418 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 PDZD3Q86UT5 571 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 SLC22A15Q8IZD6 547 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
SEC23B-207ENST00000474619 ACVR1CQ8NER5 493 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 LPGAT1Q92604 370 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 C9orf72Q96LT7 481 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 CCDC74BQ96LY2 380 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 TRIM56Q9BRZ2 755 aaKnown RBP12.11□□□□□ -0.47
SEC23B-207ENST00000474619 TRIM31Q9BZY9 425 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 ASCL3Q9NQ33 180 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 THSD1Q9NS62 852 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 C20orf96Q9NUD7 363 aaPredicted RBP12.11□□□□□ -0.47
SEC23B-207ENST00000474619 TMEM9Q9P0T7 183 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 POLG2Q9UHN1 485 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 UTP11Q9Y3A2 253 aaKnown RBP12.11□□□□□ -0.47
SEC23B-207ENST00000474619 LOXL2Q9Y4K0 774 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 PCDHGA7Q9Y5G6 932 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 CFAP20Q9Y6A4 193 aaKnown RBP12.11□□□□□ -0.47
SEC23B-207ENST00000474619 TEX264Q9Y6I9 313 aa12.11□□□□□ -0.47
SEC23B-207ENST00000474619 MN1Q10571 1320 aaPredicted RBP12.11□□□□□ -0.47
SEC23B-207ENST00000474619 UBA6A0AVT1 1052 aaPredicted RBP12.1□□□□□ -0.47
SEC23B-207ENST00000474619 IQCF5A8MTL0 148 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 CDRT15L2A8MXV6 281 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 B4E171 279 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 CAPN5O15484 640 aaPredicted RBP12.1□□□□□ -0.47
SEC23B-207ENST00000474619 ANKRD34CP0C6C1 535 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 MPSTP25325 297 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 TSPAN7P41732 249 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 PREPP48147 710 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 CAV1Q03135 178 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 C2orf54Q08AI8 447 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 HSPA14Q0VDF9 509 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 BOP1Q14137 746 aaKnown RBP12.1□□□□□ -0.47
SEC23B-207ENST00000474619 FRG1Q14331 258 aaKnown RBP12.1□□□□□ -0.47
SEC23B-207ENST00000474619 CRYMQ14894 314 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 C16orf72Q14CZ0 275 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 PLCL1Q15111 1095 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 BBS9Q3SYG4 887 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 SYTL3Q4VX76 610 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 HSP90AA5PQ58FG0 334 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 PLEKHS1Q5SXH7 462 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 TMEM164Q5U3C3 297 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 FOXR1Q6PIV2 292 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 OTOAQ7RTW8 1153 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 CLEC14AQ86T13 490 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 IGDCC3Q8IVU1 814 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 TBC1D21Q8IYX1 336 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 RCBTB1Q8NDN9 531 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 PHC3Q8NDX5 983 aa12.1□□□□□ -0.47
SEC23B-207ENST00000474619 SNIP1Q8TAD8 396 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms