RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 EOGTQ5NDL2 527 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 ADAMTSL4Q6UY14 1074 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 GLMNQ92990 594 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 ATP6V1E2Q96A05 226 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 RHBDF1Q96CC6 855 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 PTCD3Q96EY7 689 aaKnown RBP19.41■□□□□ 0.7
SSR1-204ENST00000474597 MAELQ96JY0 434 aaKnown RBP19.41■□□□□ 0.7
SSR1-204ENST00000474597 SLC12A9Q9BXP2 914 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 ATXN10Q9UBB4 475 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 TAGLN3Q9UI15 199 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 LNPEPQ9UIQ6 1025 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 PDE10AQ9Y233 779 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 NCKAP1Q9Y2A7 1128 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 STK38LQ9Y2H1 464 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 ASB1Q9Y576 335 aa19.41■□□□□ 0.7
SSR1-204ENST00000474597 TMEM202A6NGA9 273 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 DCXO43602 365 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 PLRG1O43660 514 aaKnown RBP19.4■□□□□ 0.7
SSR1-204ENST00000474597 AOC1P19801 751 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 INHBCP55103 352 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 SFSWAPQ12872 951 aaKnown RBP19.4■□□□□ 0.7
SSR1-204ENST00000474597 GTF2H2Q13888 395 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 WSCD2Q2TBF2 565 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 IER5LQ5T953 404 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 KANK2Q63ZY3 851 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 KIAA1161Q6NSJ0 714 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 GTF2H2CQ6P1K8 395 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 GPRIN3Q6ZVF9 776 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 ASRGL1Q7L266 308 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 GOLGA7Q7Z5G4 137 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 HEATR4Q86WZ0 1026 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 TREML1Q86YW5 311 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 TCAIMQ8N3R3 496 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 MCOLN3Q8TDD5 553 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 C19orf60Q96EN9 201 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 CD244Q9BZW8 370 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 OPTCQ9UBM4 332 aa19.4■□□□□ 0.7
SSR1-204ENST00000474597 G3BP2Q9UN86 482 aaKnown RBP19.4■□□□□ 0.7
SSR1-204ENST00000474597 ESRRBO95718 433 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 CHEK2O96017 543 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 MAP4P27816 1152 aaKnown RBP19.39■□□□□ 0.7
SSR1-204ENST00000474597 PKNOX1P55347 436 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 CDKL1Q00532 357 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 AGERQ15109 404 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 SMAD2Q15796 467 aaKnown RBP19.39■□□□□ 0.7
SSR1-204ENST00000474597 SLC44A4Q53GD3 710 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 METTL2BQ6P1Q9 378 aaKnown RBP19.39■□□□□ 0.7
SSR1-204ENST00000474597 EFL1Q7Z2Z2 1120 aaKnown RBP19.39■□□□□ 0.7
SSR1-204ENST00000474597 KIF2BQ8N4N8 673 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 TEX9Q8N6V9 391 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 ACTRT2Q8TDY3 377 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 TWIST2Q8WVJ9 160 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 FOPNLQ96NB1 174 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 ZNF382Q96SR6 550 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 C1QTNF7Q9BXJ2 289 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 LRMDAQ9H2I8 198 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 NOL11Q9H8H0 719 aaKnown RBP19.39■□□□□ 0.7
SSR1-204ENST00000474597 ZFR2Q9UPR6 939 aaKnown RBP19.39■□□□□ 0.7
SSR1-204ENST00000474597 DNAJC15Q9Y5T4 150 aa19.39■□□□□ 0.7
SSR1-204ENST00000474597 SLC5A10A0PJK1 596 aa19.39■□□□□ 0.69
SSR1-204ENST00000474597 TAPBPO15533 448 aa19.39■□□□□ 0.69
SSR1-204ENST00000474597 SRFP11831 508 aa19.39■□□□□ 0.69
SSR1-204ENST00000474597 ZNF8P17098 575 aaPredicted RBP19.39■□□□□ 0.69
SSR1-204ENST00000474597 PTPN4P29074 926 aa19.39■□□□□ 0.69
SSR1-204ENST00000474597 MAPK9P45984 424 aa19.39■□□□□ 0.69
SSR1-204ENST00000474597 ABRQ12979 859 aa19.39■□□□□ 0.69
SSR1-204ENST00000474597 MBOAT1Q6ZNC8 495 aa19.39■□□□□ 0.69
SSR1-204ENST00000474597 SYVN1Q86TM6 617 aa19.39■□□□□ 0.69
SSR1-204ENST00000474597 KBTBD6Q86V97 674 aa19.39■□□□□ 0.69
SSR1-204ENST00000474597 DDIASQ8IXT1 998 aa19.39■□□□□ 0.69
SSR1-204ENST00000474597 CFAP61Q8NHU2 1237 aa19.39■□□□□ 0.69
SSR1-204ENST00000474597 UBTD2Q8WUN7 234 aa19.39■□□□□ 0.69
SSR1-204ENST00000474597 KLK6Q92876 244 aa19.39■□□□□ 0.69
SSR1-204ENST00000474597 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.39■□□□□ 0.697e-8■■■□□ 15.1
SSR1-204ENST00000474597 GPR34Q9UPC5 381 aa19.39■□□□□ 0.69
SSR1-204ENST00000474597 TBC1D3DA0A087WVF3 549 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 TBC1D3IA0A087WXS9 549 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 TBC1D3EA0A087X179 549 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 TBC1D3KA0A087X1G2 549 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 TBC1D3FA6NER0 549 aaPredicted RBP19.38■□□□□ 0.69
SSR1-204ENST00000474597 TBC1D3LB9A6J9 549 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 GFYI3L273 518 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 LIN7AO14910 233 aaPredicted RBP19.38■□□□□ 0.69
SSR1-204ENST00000474597 RNGTTO60942 597 aaKnown RBP19.38■□□□□ 0.69
SSR1-204ENST00000474597 PAK4O96013 591 aaPredicted RBP19.38■□□□□ 0.69
SSR1-204ENST00000474597 GSTM1P09488 218 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 TBC1D3HP0C7X1 549 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 UROSP10746 265 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 NQO1P15559 274 aaKnown RBP19.38■□□□□ 0.69
SSR1-204ENST00000474597 PREPP48147 710 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 CCNG1P51959 295 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 ADPRHP54922 357 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 FOXA1P55317 472 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 CDK3Q00526 305 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 GSTM4Q03013 218 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 MLLT1Q03111 559 aaPredicted RBP19.38■□□□□ 0.69
SSR1-204ENST00000474597 TDGQ13569 410 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 UGT3A2Q3SY77 523 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 TBC1D3GQ6DHY5 549 aa19.38■□□□□ 0.69
SSR1-204ENST00000474597 TBC1D3CQ6IPX1 549 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms