RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 F8WDY8 70 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 PODXLO00592 558 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 AURKAO14965 403 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 LANCL1O43813 399 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 POP7O75817 140 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 AGTP01019 485 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 OCM2P0CE71 109 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 OCMP0CE72 109 aaPredicted RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 SLC2A1P11166 492 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CNR1P21554 472 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 UCP1P25874 307 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 HTR1BP28222 390 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 HSD11B1P28845 292 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 GGT5P36269 586 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 OMPP47874 163 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 RAB13P51153 203 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 RPS8P62241 208 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 REEP5Q00765 189 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SELENBP1Q13228 472 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 DGCR6Q14129 220 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 HLXQ14774 488 aaPredicted RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 ZNHIT3Q15649 155 aaPredicted RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 PTGISQ16647 500 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 MANEALQ5VSG8 457 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CDCP2Q5VXM1 449 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 LRRC66Q68CR7 880 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 ZFP1Q6P2D0 407 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 S100A7AQ86SG5 101 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SERINC5Q86VE9 423 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 ZNF573Q86YE8 665 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CNGA4Q8IV77 575 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 DHX40Q8IX18 779 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 FAM71AQ8IYT1 594 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 OR2L5Q8NG80 312 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 OR6X1Q8NH79 312 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SPPL2AQ8TCT8 520 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CSGALNACT1Q8TDX6 532 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CHPT1Q8WUD6 406 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SMPDL3AQ92484 453 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 C5orf30Q96GV9 206 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 LRFN5Q96NI6 719 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 KLHL5Q96PQ7 755 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TEFMQ96QE5 360 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 GCNAQ96QF7 691 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 OLFM1Q99784 485 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 C11orf70Q9BRQ4 267 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 BCO2Q9BYV7 579 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 EGLN1Q9GZT9 426 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 VIPAS39Q9H9C1 493 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 PGPEP1Q9NXJ5 209 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 APEX2Q9UBZ4 518 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TUBD1Q9UJT1 453 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 RAB21Q9UL25 225 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 COPS3Q9UNS2 423 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 WBP11Q9Y2W2 641 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 MAB21L2Q9Y586 359 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 RNF215Q9Y6U7 377 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 POLR3AO14802 1390 aaPredicted RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 MRC2Q9UBG0 1479 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 PRDM15P57071 1507 aaPredicted RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 RPTORQ8N122 1335 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SIGLEC16A6NMB1 481 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 BECN2A8MW95 431 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 ADAMDEC1O15204 470 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 GPAA1O43292 621 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CCNT2O60583 730 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 HSF2BPO75031 334 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 RECQL5O94762 991 aaPredicted RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 AHSA1O95433 338 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 LYNP07948 512 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 FBP1P09467 338 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CDH1P12830 882 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 EPORP19235 508 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TNFRSF1AP19438 455 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 FGFR3P22607 806 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 WARSP23381 471 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 F8A1P23610 371 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 AOAHP28039 575 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 EPHX2P34913 555 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 PCK1P35558 622 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CDH13P55290 713 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 IL2P60568 153 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 VSNL1P62760 191 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 HYAL2Q12891 473 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TRAM2Q15035 370 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CAMK4Q16566 473 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 DECR1Q16698 335 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 ARMC12Q5T9G4 340 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 TSSK4Q6SA08 328 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SSX9Q7RTT3 188 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 POLNQ7Z5Q5 900 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 YRDCQ86U90 279 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 AACSQ86V21 672 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 SFR1Q86XK3 245 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 CYB561A3Q8NBI2 242 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 OR10H4Q8NGA5 316 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 PNPT1Q8TCS8 783 aaKnown RBP3.43□□□□□ -1.86
UBR3-208ENST00000474426 RHPN1Q8TCX5 695 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 EDEM1Q92611 657 aa3.43□□□□□ -1.86
UBR3-208ENST00000474426 GLG1Q92896 1179 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms