RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 CUZD1Q86UP6 607 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 AMZ2Q86W34 360 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 OOSP2Q86WS3 158 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 RAB43Q86YS6 212 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 MCEMP1Q8IX19 187 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 GALNT16Q8N428 558 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 TTC30BQ8N4P2 665 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 CNTD1Q8N815 330 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 CLEC1AQ8NC01 280 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 OR1L3Q8NH93 324 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 CPT1BQ92523 772 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 TADA1Q96BN2 335 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 TRIM11Q96F44 468 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 SGSM3Q96HU1 749 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 BTBD6Q96KE9 485 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 ZNF670Q9BS34 389 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 GPR63Q9BZJ6 419 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 ILKAPQ9H0C8 392 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 ISCUQ9H1K1 167 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 HAUS4Q9H6D7 363 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 ZNF552Q9H707 407 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 ZFAND3Q9H8U3 227 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 ACTR5Q9H9F9 607 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 FANCEQ9HB96 536 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 ZBTB20Q9HC78 741 aaPredicted RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 MAGEE1Q9HCI5 957 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 MRPL47Q9HD33 250 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 IMP3Q9NV31 184 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 SOHLH2Q9NX45 425 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 TMEM63CQ9P1W3 806 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 POMT2Q9UKY4 750 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 PSMD13Q9UNM6 376 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 CSAG2Q9Y5P2 127 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 CFAP20Q9Y6A4 193 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 FER1L5A0AVI2 2057 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 ANKHD1Q8IWZ3 2542 aaKnown RBP4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 NAV3Q8IVL0 2385 aa4.99□□□□□ -1.61
SNRNP40-204ENST00000474025 MDC1Q14676 2089 aaKnown RBP4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 OR6C74A6NCV1 312 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 SLC9B1P1A6NJY1 282 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 TMEM150CB9EJG8 249 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 C9J4A7 227 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 MASP2O00187 686 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 GPR39O43194 453 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 ZG16O60844 167 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 POLR2CP19387 275 aaPredicted RBP4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 HLA-DPA1P20036 260 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 MX2P20592 715 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 CYP2A7P20853 494 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 PBLDP30039 288 aaPredicted RBP4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 HADHAP40939 763 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 GLRBP48167 497 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 SOX8P57073 446 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 MYL5Q02045 173 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 PPIDQ08752 370 aaKnown RBP4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 XRCC4Q13426 336 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 GTF2H3Q13889 308 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 LLGL1Q15334 1064 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 ASIC2Q16515 512 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 ANO6Q4KMQ2 910 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 ATP13A4Q4VNC1 1196 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 METRNLQ641Q3 311 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 KCNMB4Q86W47 210 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 ZGRF1Q86YA3 2104 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 CPNE8Q86YQ8 564 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 MEIOBQ8N635 442 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 PQLC3Q8N755 202 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 RASGEF1AQ8N9B8 481 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 CCNYQ8ND76 341 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 DDHD1Q8NEL9 900 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 ANKRD20A12PQ8NF67 263 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 GDAP1Q8TB36 358 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 BRSK1Q8TDC3 778 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 TM9SF4Q92544 642 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 FAF2Q96CS3 445 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 CLIP3Q96DZ5 547 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 IMP4Q96G21 291 aaKnown RBP4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 FER1L6-AS2Q96M78 137 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 C12orf66Q96MD2 445 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 IP6K3Q96PC2 410 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 INSM2Q96T92 566 aaPredicted RBP4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 DPH2Q9BQC3 489 aaPredicted RBP4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 DHRS4Q9BTZ2 278 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 CEP41Q9BYV8 373 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 ZCCHC2Q9C0B9 1178 aaKnown RBP4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 HSD3B7Q9H2F3 369 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 KIR3DX1Q9H7L2 352 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 SYTL2Q9HCH5 934 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 BPIFA1Q9NP55 256 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 IL26Q9NPH9 171 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 AGPAT4Q9NRZ5 378 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 C1GALT1Q9NS00 363 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 AIPL1Q9NZN9 384 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 IP6K2Q9UHH9 426 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 SLC24A2Q9UI40 661 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 ANAPC7Q9UJX3 599 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 NOVA2Q9UNW9 492 aaKnown RBP4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 OSGIN2Q9Y236 505 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 PADI2Q9Y2J8 665 aa4.98□□□□□ -1.61
SNRNP40-204ENST00000474025 SPO11Q9Y5K1 396 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms