RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 TRIM72Q6ZMU5 477 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 TAOK1Q7L7X3 1001 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 GALNTL5Q7Z4T8 443 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 TBC1D26Q86UD7 250 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 SERINC5Q86VE9 423 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 IQCA1Q86XH1 822 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 DNAAF5Q86Y56 855 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 GALNT13Q8IUC8 556 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 ARHGAP12Q8IWW6 846 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 ADGRF4Q8IZF3 695 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 DPP10Q8N608 796 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 TMCO5AQ8N6Q1 288 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 PI4KAP1Q8N8J0 262 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 SETD9Q8NE22 299 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 FAM110DQ8TAY7 271 aaPredicted RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 FAM3CQ92520 227 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 DNASE1L2Q92874 299 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 OTULINQ96BN8 352 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 CCDC34Q96HJ3 373 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 ZNF419Q96HQ0 510 aaPredicted RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 KAZALD1Q96I82 304 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 C1orf74Q96LT6 269 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 HARBI1Q96MB7 349 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 TTC14Q96N46 770 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 WDFY2Q96P53 400 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 TEFMQ96QE5 360 aaKnown RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 MAP7D2Q96T17 732 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 FSD1LQ9BXM9 530 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 TEX13BQ9BXU2 312 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 KLHL4Q9C0H6 718 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 OSGEPL1Q9H4B0 414 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 KIF9Q9HAQ2 790 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 BPIFA1Q9NP55 256 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 PDE7BQ9NP56 450 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 PAPOLBQ9NRJ5 636 aaKnown RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 HEBP1Q9NRV9 189 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 GIMAP4Q9NUV9 329 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 TMEM248Q9NWD8 314 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 ARHGEF38Q9NXL2 777 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 DONSONQ9NYP3 566 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 FBXO40Q9UH90 709 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 SLCO3A1Q9UIG8 710 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 RASAL2Q9UJF2 1139 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 INTS6Q9UL03 887 aaKnown RBP2.37□□□□□ -2.03
CALD1-216ENST00000473714 DTX4Q9Y2E6 619 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.37□□□□□ -2.03
CALD1-216ENST00000473714 FAM169AQ9Y6X4 670 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 APCP25054 2843 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 PCDH15Q96QU1 1955 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 NRCAMQ92823 1304 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 CSMD2Q7Z408 3487 aa2.37□□□□□ -2.03
CALD1-216ENST00000473714 VWA8A3KMH1 1905 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 PTPRDP23468 1912 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 TARSL2A2RTX5 802 aaKnown RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 CXorf65A6NEN9 183 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 LRRC72A6NJI9 287 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 AGAP14A8MT82 685 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 KCNJ18B7U540 433 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 K7ENP7 123 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 HAS3O00219 553 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 SH2B2O14492 632 aaPredicted RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 LIASO43766 372 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 JTBO76095 146 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 TJP3O95049 919 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 NKX2-2O95096 273 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 DDAH2O95865 285 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 ABCB1P08183 1280 aaPredicted RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 HOXB7P09629 217 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 RFPL3SP0C7P2 107 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 MYBL1P10243 752 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 EGR2P11161 476 aaPredicted RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 APEHP13798 732 aaKnown RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 PRF1P14222 555 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 ST6GAL1P15907 406 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 IL7RP16871 459 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 CASTP20810 708 aaKnown RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 EPHB2P29323 1055 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 OAS2P29728 719 aaKnown RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 CA8P35219 290 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 RBMXP38159 391 aaKnown RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 TNNT3P45378 269 aaPredicted RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 SLC15A1P46059 708 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 GABRB2P47870 512 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 CAMPP49913 170 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 BLKP51451 505 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 ATXN3P54252 364 aaPredicted RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 ARSFP54793 590 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 F2RL1P55085 397 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 CYP4F2P78329 520 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 ZBED6P86452 979 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 SORDQ00796 357 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 TFAP4Q01664 338 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 MECOMQ03112 1051 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 PPARDQ03181 441 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 CEBPZQ03701 1054 aaKnown RBP2.36□□□□□ -2.03
CALD1-216ENST00000473714 KLRC3Q07444 240 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 NIPAL4Q0D2K0 466 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 FOXI1Q12951 378 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 CAMK2DQ13557 499 aa2.36□□□□□ -2.03
CALD1-216ENST00000473714 LARS2Q15031 903 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms