RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 EBLN1P0CF75 366 aa14.9□□□□□ -0.02
VTI1A-203ENST00000472892 TPH1P17752 444 aa14.9□□□□□ -0.02
VTI1A-203ENST00000472892 PSMA3P25788 255 aa14.9□□□□□ -0.02
VTI1A-203ENST00000472892 NDUFS1P28331 727 aa14.9□□□□□ -0.02
VTI1A-203ENST00000472892 CDKN1CP49918 316 aaPredicted RBP14.9□□□□□ -0.02
VTI1A-203ENST00000472892 KIF5AQ12840 1032 aa14.9□□□□□ -0.02
VTI1A-203ENST00000472892 ZNF658BQ4V348 819 aaPredicted RBP14.9□□□□□ -0.02
VTI1A-203ENST00000472892 GAS2L3Q86XJ1 694 aa14.9□□□□□ -0.02
VTI1A-203ENST00000472892 CDKN2AIPNLQ96HQ2 116 aa14.9□□□□□ -0.02
VTI1A-203ENST00000472892 DNAJC1Q96KC8 554 aaKnown RBP14.9□□□□□ -0.02
VTI1A-203ENST00000472892 LRRC40Q9H9A6 602 aa14.9□□□□□ -0.02
VTI1A-203ENST00000472892 FGF21Q9NSA1 209 aa14.9□□□□□ -0.02
VTI1A-203ENST00000472892 NLE1Q9NVX2 485 aaPredicted RBP14.9□□□□□ -0.02
VTI1A-203ENST00000472892 FAM8A1Q9UBU6 413 aa14.9□□□□□ -0.02
VTI1A-203ENST00000472892 PACSIN2Q9UNF0 486 aaPredicted RBP14.9□□□□□ -0.02
VTI1A-203ENST00000472892 R3HDM2Q9Y2K5 976 aaKnown RBP14.9□□□□□ -0.02
VTI1A-203ENST00000472892 HEBP2Q9Y5Z4 205 aa14.9□□□□□ -0.02
VTI1A-203ENST00000472892 KCNMB2Q9Y691 235 aa14.9□□□□□ -0.02
VTI1A-203ENST00000472892 A0A0U1RQJ8 604 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 PSMD3O43242 534 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 CREG1O75629 220 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 ZBTB11O95625 1053 aaPredicted RBP14.89□□□□□ -0.03
VTI1A-203ENST00000472892 FTCDO95954 541 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 PTMAP06454 111 aaKnown RBP14.89□□□□□ -0.03
VTI1A-203ENST00000472892 ACRV1P26436 265 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 CD151P48509 253 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 ARL4DP49703 201 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 KPNA2P52292 529 aaKnown RBP14.89□□□□□ -0.03
VTI1A-203ENST00000472892 GDF10P55107 478 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 TUBB4BP68371 445 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 TUBB2AQ13885 445 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 ERV3-1Q14264 604 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 KRT33BQ14525 404 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 P3H1Q32P28 736 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 ARMC6Q6NXE6 501 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 SERPINA9Q86WD7 417 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 PTRH1Q86Y79 214 aaKnown RBP14.89□□□□□ -0.03
VTI1A-203ENST00000472892 TXLNBQ8N3L3 684 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 ACVR1CQ8NER5 493 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 OR4E2Q8NGC2 313 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 C9orf43Q8TAL5 461 aaPredicted RBP14.89□□□□□ -0.03
VTI1A-203ENST00000472892 ABHD17AQ96GS6 310 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 HES6Q96HZ4 224 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 TMEM121Q9BTD3 319 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 TUBB2BQ9BVA1 445 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 TRIM4Q9C037 500 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 OR52A5Q9H2C5 316 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 COG4Q9H9E3 785 aa14.89□□□□□ -0.03
VTI1A-203ENST00000472892 AKIRIN1Q9H9L7 192 aaPredicted RBP14.89□□□□□ -0.03
VTI1A-203ENST00000472892 TCRBV7S2A1N4TA0A589 114 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 MROH6A6NGR9 719 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 C21orf140B9A014 251 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 KATNA1O75449 491 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 AP2A1O95782 977 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 NTRK1P04629 796 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 FURINP09958 794 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 CACNG1Q06432 222 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 RPA4Q13156 261 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 DNASE1L3Q13609 305 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 ZRANB3Q5FWF4 1079 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 MICALCLQ6ZW33 695 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 TAS2R42Q7RTR8 314 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 OR8K5Q8NH50 307 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 CT55Q8WUE5 264 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 STYXQ8WUJ0 223 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 ZNF501Q96CX3 271 aaPredicted RBP14.88□□□□□ -0.03
VTI1A-203ENST00000472892 PPM1MQ96MI6 270 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 FERD3LQ96RJ6 166 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 GPR87Q9BY21 358 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 TFB2MQ9H5Q4 396 aaKnown RBP14.88□□□□□ -0.03
VTI1A-203ENST00000472892 ZNF71Q9NQZ8 489 aaPredicted RBP14.88□□□□□ -0.03
VTI1A-203ENST00000472892 KCND1Q9NSA2 647 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 IMPACTQ9P2X3 320 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 BTRCQ9Y297 605 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 MYO18BQ8IUG5 2567 aa14.88□□□□□ -0.03
VTI1A-203ENST00000472892 MATN2O00339 956 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 AP2A2O94973 939 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 GSTM1P09488 218 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 PRSS56P0CW18 603 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 POLR2CP19387 275 aaPredicted RBP14.87□□□□□ -0.03
VTI1A-203ENST00000472892 PDHA2P29803 388 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 STIP1P31948 543 aaKnown RBP14.87□□□□□ -0.03
VTI1A-203ENST00000472892 ARCN1P48444 511 aaKnown RBP14.87□□□□□ -0.03
VTI1A-203ENST00000472892 GSTM4Q03013 218 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 PRKAA1Q13131 559 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 SEPT6Q14141 434 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 POU6F1Q14863 301 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 TMTC4Q5T4D3 741 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 ZNF517Q6ZMY9 492 aaPredicted RBP14.87□□□□□ -0.03
VTI1A-203ENST00000472892 PIANPQ8IYJ0 282 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 RNF10Q8N5U6 811 aaKnown RBP14.87□□□□□ -0.03
VTI1A-203ENST00000472892 CLDN19Q8N6F1 224 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 LCN9Q8WX39 176 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 DESI2Q9BSY9 194 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 SRMSQ9H3Y6 488 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 MVB12BQ9H7P6 319 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 VPS37BQ9H9H4 285 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 C1GALT1Q9NS00 363 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 ANAPC2Q9UJX6 822 aa14.87□□□□□ -0.03
VTI1A-203ENST00000472892 POMT2Q9UKY4 750 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms