RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 ATP1B2P14415 290 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-210ENST00000472880 POLR2CP19387 275 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-210ENST00000472880 KPNA2P52292 529 aaKnown RBP19.24■□□□□ 0.67
COL9A3-210ENST00000472880 RPS15P62841 145 aaKnown RBP19.24■□□□□ 0.67
COL9A3-210ENST00000472880 IGFBP7Q16270 282 aa19.24■□□□□ 0.67
COL9A3-210ENST00000472880 COLEC12Q5KU26 742 aa19.24■□□□□ 0.67
COL9A3-210ENST00000472880 CAPRIN2Q6IMN6 1127 aaKnown RBP19.24■□□□□ 0.67
COL9A3-210ENST00000472880 FAM199XQ6PEV8 388 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-210ENST00000472880 GAS2L3Q86XJ1 694 aa19.24■□□□□ 0.67
COL9A3-210ENST00000472880 LILRA3Q8N6C8 439 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-210ENST00000472880 TEX19Q8NA77 164 aa19.24■□□□□ 0.67
COL9A3-210ENST00000472880 ACVR1CQ8NER5 493 aa19.24■□□□□ 0.67
COL9A3-210ENST00000472880 PANX2Q96RD6 677 aa19.24■□□□□ 0.67
COL9A3-210ENST00000472880 RUFY1Q96T51 708 aa19.24■□□□□ 0.67
COL9A3-210ENST00000472880 C19orf43Q9BQ61 176 aa19.24■□□□□ 0.67
COL9A3-210ENST00000472880 FAM96AQ9H5X1 160 aa19.24■□□□□ 0.67
COL9A3-210ENST00000472880 VPS37BQ9H9H4 285 aa19.24■□□□□ 0.67
COL9A3-210ENST00000472880 KCND1Q9NSA2 647 aa19.24■□□□□ 0.67
COL9A3-210ENST00000472880 POMT2Q9UKY4 750 aa19.24■□□□□ 0.67
COL9A3-210ENST00000472880 BTRCQ9Y297 605 aa19.24■□□□□ 0.67
COL9A3-210ENST00000472880 EPN1Q9Y6I3 576 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-210ENST00000472880 RCCD1A6NED2 376 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 MATN2O00339 956 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 CCL22O00626 93 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 PTMAP06454 111 aaKnown RBP19.23■□□□□ 0.67
COL9A3-210ENST00000472880 CDH3P22223 829 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 PTPN4P29074 926 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 MC4RP32245 332 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 RPS18P62269 152 aaKnown RBP19.23■□□□□ 0.67
COL9A3-210ENST00000472880 SPARCL1Q14515 664 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 GPR33Q49SQ1 333 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 ASB18Q6ZVZ8 466 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 SYVN1Q86TM6 617 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 APLFQ8IW19 511 aaPredicted RBP19.23■□□□□ 0.67
COL9A3-210ENST00000472880 OR4E2Q8NGC2 313 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 MR1Q95460 341 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 ZNF501Q96CX3 271 aaPredicted RBP19.23■□□□□ 0.67
COL9A3-210ENST00000472880 TLR10Q9BXR5 811 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 SRMSQ9H3Y6 488 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 COG4Q9H9E3 785 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 LATS2Q9NRM7 1088 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 TLK1Q9UKI8 766 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 HECTD1Q9ULT8 2610 aa19.23■□□□□ 0.67
COL9A3-210ENST00000472880 C17orf113A0A1B0GUU1 675 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 GSAPA4D1B5 854 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 K7EM74 188 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 IFRD1O00458 451 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-210ENST00000472880 MSLNQ13421 630 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-210ENST00000472880 SEMA5AQ13591 1074 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 UGT8Q16880 541 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 DENND5AQ6IQ26 1287 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 AADACL2Q6P093 401 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 ZNF449Q6P9G9 518 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 FBXO38Q6PIJ6 1188 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 ARHGEF18Q6ZSZ5 1173 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 TMTC1Q8IUR5 882 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 LCN9Q8WX39 176 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 THAP4Q8WY91 577 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 ALG3Q92685 438 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 DNAJC1Q96KC8 554 aaKnown RBP19.22■□□□□ 0.67
COL9A3-210ENST00000472880 PPM1MQ96MI6 270 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 FERD3LQ96RJ6 166 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 AKIRIN1Q9H9L7 192 aaPredicted RBP19.22■□□□□ 0.67
COL9A3-210ENST00000472880 ARNT2Q9HBZ2 717 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 C1GALT1Q9NS00 363 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 ZDHHC3Q9NYG2 299 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 DUSP10Q9Y6W6 482 aa19.22■□□□□ 0.67
COL9A3-210ENST00000472880 GOLGA6L9A6NEM1 432 aa19.21■□□□□ 0.67
COL9A3-210ENST00000472880 BTNL10A8MVZ5 291 aa19.21■□□□□ 0.67
COL9A3-210ENST00000472880 LDB2O43679 373 aa19.21■□□□□ 0.67
COL9A3-210ENST00000472880 DNAJB5O75953 348 aa19.21■□□□□ 0.67
COL9A3-210ENST00000472880 KLK3P07288 261 aaPredicted RBP19.21■□□□□ 0.67
COL9A3-210ENST00000472880 ZNF75DP51815 510 aa19.21■□□□□ 0.67
COL9A3-210ENST00000472880 GSDMDP57764 484 aa19.21■□□□□ 0.67
COL9A3-210ENST00000472880 GPS2Q13227 327 aa19.21■□□□□ 0.67
COL9A3-210ENST00000472880 ZRANB3Q5FWF4 1079 aa19.21■□□□□ 0.67
COL9A3-210ENST00000472880 CPT1BQ92523 772 aa19.21■□□□□ 0.67
COL9A3-210ENST00000472880 MRFAP1L1Q96HT8 127 aa19.21■□□□□ 0.67
COL9A3-210ENST00000472880 IGLV3-16A0A075B6K0 115 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 SLC9B1P1A6NJY1 282 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 CYSRT1A8MQ03 144 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 MAP3K7O43318 606 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 ACRV1P26436 265 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 IL10RAQ13651 578 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 TAS2R42Q7RTR8 314 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 SERPINA9Q86WD7 417 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 KLHDC8BQ8IXV7 354 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 TTC13Q8NBP0 860 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 LRFN5Q96NI6 719 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 TRIM55Q9BYV6 548 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 OR52A5Q9H2C5 316 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 LRRC40Q9H9A6 602 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 SYTL2Q9HCH5 934 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 PLAAQ9Y263 795 aa19.2■□□□□ 0.66
COL9A3-210ENST00000472880 FARSAQ9Y285 508 aaKnown RBP19.2■□□□□ 0.66
COL9A3-210ENST00000472880 REXO2Q9Y3B8 237 aaKnown RBP19.2■□□□□ 0.66
COL9A3-210ENST00000472880 TRBV5-4A0A0C4DH59 114 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 GRID2IPA4D2P6 1211 aa19.19■□□□□ 0.66
COL9A3-210ENST00000472880 DDX3YO15523 660 aaKnown RBP19.19■□□□□ 0.66
COL9A3-210ENST00000472880 PREPP48147 710 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms