RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	PDHA2	P29803	388 aa		14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	PPP1CA	P62136	330 aa		14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	PRKAA1	Q13131	559 aa		14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	PRKG2	Q13237	762 aa		14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	TPSAB1	Q15661	275 aa		14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	AARS2	Q5JTZ9	985 aa	Known RBP	14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	DNTTIP2	Q5QJE6	756 aa	Known RBP	14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	ARHGAP22	Q7Z5H3	698 aa		14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	IL22RA1	Q8N6P7	574 aa		14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	PHC3	Q8NDX5	983 aa		14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	OR4E2	Q8NGC2	313 aa		14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	GRK7	Q8WTQ7	553 aa		14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	BBC3	Q96PG8	261 aa	Predicted RBP	14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	CCNL2	Q96S94	520 aa	Predicted RBP	14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	TSSK1B	Q9BXA7	367 aa		14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	APMAP	Q9HDC9	416 aa		14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	PYCARD	Q9ULZ3	195 aa		14.45	□□□□□ -0.1
SSR4-208	ENST00000471880	C17orf113	A0A1B0GUU1	675 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	GSAP	A4D1B5	854 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880		B4E171	279 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	CD3EAP	O15446	510 aa	Known RBP	14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	AVIL	O75366	819 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	NDUFS3	O75489	264 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	POLR2C	P19387	275 aa	Predicted RBP	14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	CD82	P27701	267 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	TSPAN7	P41732	249 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	ATP1A2	P50993	1020 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	CDK16	Q00536	496 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	VAC14	Q08AM6	782 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	SRSF6	Q13247	344 aa	Known RBP	14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	PTRHD1	Q6GMV3	140 aa	Known RBP	14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	LRRC8B	Q6P9F7	803 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	CEACAM20	Q6UY09	585 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	CERS6	Q6ZMG9	384 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	RASGRP3	Q8IV61	690 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	ACTRT1	Q8TDG2	376 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	LCN9	Q8WX39	176 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	OR6C1	Q96RD1	312 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	DDA1	Q9BW61	102 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	SRMS	Q9H3Y6	488 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	PRORY	Q9H606	182 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	PDP2	Q9P2J9	529 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	ASIC3	Q9UHC3	531 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	SLC24A2	Q9UI40	661 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	RIMKLB	Q9ULI2	386 aa		14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	TDRKH	Q9Y2W6	561 aa	Known RBP	14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	FASN	P49327	2511 aa	Known RBP	14.44	□□□□□ -0.1
SSR4-208	ENST00000471880	GOLGA8K	D6RF30	607 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	GOLGA8T	H3BQL2	631 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	LIN7A	O14910	233 aa	Predicted RBP	14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	VAPB	O95292	243 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	C9	P02748	559 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	TCP1	P17987	556 aa	Known RBP	14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	TTPA	P49638	278 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	SH3BP2	P78314	561 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	MC2R	Q01718	297 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	HSPA14	Q0VDF9	509 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	SEMA3A	Q14563	771 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	KCNJ11	Q14654	390 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	TAF1B	Q53T94	588 aa	Predicted RBP	14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	ANKRD22	Q5VYY1	191 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	CAPRIN2	Q6IMN6	1127 aa	Known RBP	14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	PACS1	Q6VY07	963 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	ZNF534	Q76KX8	674 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	ZSCAN1	Q8NBB4	408 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	SIDT2	Q8NBJ9	832 aa	Known RBP	14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	CFAP61	Q8NHU2	1237 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	GSDMB	Q8TAX9	411 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	SKA2	Q8WVK7	121 aa	Predicted RBP	14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	TFG	Q92734	400 aa	Predicted RBP	14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	DDX47	Q9H0S4	455 aa	Known RBP	14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	KIR3DX1	Q9H7L2	352 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	SOHLH2	Q9NX45	425 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	MARCH4	Q9P2E8	410 aa	Predicted RBP	14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	TSR3	Q9UJK0	312 aa	Known RBP	14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	ASF1A	Q9Y294	204 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	MAD1L1	Q9Y6D9	718 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	ATM	Q13315	3056 aa		14.43	□□□□□ -0.1
SSR4-208	ENST00000471880	OR5K3	A6NET4	321 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	IQCF5	A8MTL0	148 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	RAD1	O60671	282 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	GSTM1	P09488	218 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	ANKRD34C	P0C6C1	535 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	PAM	P19021	973 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	CDH3	P22223	829 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	EIF3B	P55884	814 aa	Known RBP	14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	GSTM4	Q03013	218 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	ACVR1	Q04771	509 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	RPA4	Q13156	261 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	KCNAB1	Q14722	419 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	SOWAHC	Q53LP3	525 aa	Predicted RBP	14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	HOOK3	Q86VS8	718 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	KLHL7	Q8IXQ5	586 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	CACNA2D3	Q8IZS8	1091 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	KRT222	Q8N1A0	295 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	MPP5	Q8N3R9	675 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	BMPER	Q8N8U9	685 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	ACVR1C	Q8NER5	493 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	CPT1B	Q92523	772 aa		14.42	□□□□□ -0.1

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