RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TLR10Q9BXR5 811 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 OR52A5Q9H2C5 316 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 STN1Q9H668 368 aaKnown RBP7.87□□□□□ -1.15
USP48-207ENST00000471752 LHX9Q9NQ69 397 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 POT1Q9NUX5 634 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 HAUS2Q9NVX0 235 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 SLC2A6Q9UGQ3 507 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 TLK1Q9UKI8 766 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 TP53TG5Q9Y2B4 290 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 PKP3Q9Y446 797 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 PCSK5Q92824 1860 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 KRT87PA6NCN2 255 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 GOLGA6L3A6NEY3 463 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 BTN3A1O00481 513 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 ARHGAP6O43182 974 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 MTSS1O43312 755 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 OR1I1O60431 355 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 CAPN1P07384 714 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 ST6GAL1P15907 406 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 MC4RP32245 332 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 GEMP55040 296 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 NAP1L1P55209 391 aaKnown RBP7.86□□□□□ -1.15
USP48-207ENST00000471752 KLF1Q13351 362 aaPredicted RBP7.86□□□□□ -1.15
USP48-207ENST00000471752 TUBB3Q13509 450 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 DNASE1L3Q13609 305 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 SEMA3AQ14563 771 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 POU6F1Q14863 301 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 PLCL1Q15111 1095 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 SPA17Q15506 151 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 DBN1Q16643 649 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.86□□□□□ -1.15
USP48-207ENST00000471752 BCL7AQ4VC05 210 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 ZNF789Q5FWF6 425 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 PLEKHS1Q5SXH7 462 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 TAS2R42Q7RTR8 314 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 LDB1Q86U70 411 aaPredicted RBP7.86□□□□□ -1.15
USP48-207ENST00000471752 D2HGDHQ8N465 521 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 ESX1Q8N693 406 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 SIDT2Q8NBJ9 832 aaKnown RBP7.86□□□□□ -1.15
USP48-207ENST00000471752 ZNF501Q96CX3 271 aaPredicted RBP7.86□□□□□ -1.15
USP48-207ENST00000471752 PANX2Q96RD6 677 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 VAT1Q99536 393 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 ZPBPQ9BS86 351 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 TMEM121Q9BTD3 319 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 FSD1LQ9BXM9 530 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 TWSG1Q9GZX9 223 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 RAB33BQ9H082 229 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 CHST8Q9H2A9 424 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 EPB41L1Q9H4G0 881 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 ACTL8Q9H568 366 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 FAM60AQ9NP50 221 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 FGF21Q9NSA1 209 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 SMOXQ9NWM0 555 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 SPHK1Q9NYA1 384 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.86□□□□□ -1.15
USP48-207ENST00000471752 HACD3Q9P035 362 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 PADI1Q9ULC6 663 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 PLAGL1Q9UM63 463 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 KLHL20Q9Y2M5 609 aa7.86□□□□□ -1.15
USP48-207ENST00000471752 IGLV3-16A0A075B6K0 115 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 TRBV5-4A0A0C4DH59 114 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 UBA6A0AVT1 1052 aaPredicted RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 CCDC162PA2VCL2 907 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 C5orf60A6NFR6 353 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 C2orf81A6NN90 581 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 TOX3O15405 576 aaPredicted RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 CREG1O75629 220 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 ANXA9O76027 345 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 F7P08709 466 aaPredicted RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 ZSCAN5DPP0CG00 497 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 ATP1B2P14415 290 aaPredicted RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 PRDX3P30048 256 aaKnown RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 PTPN7P35236 360 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 CYLC1P35663 651 aaPredicted RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 HALP42357 657 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 LMAN1P49257 510 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 VAV2P52735 878 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 CSE1LP55060 971 aaKnown RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 RWDD2BP57060 319 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 COPS2P61201 443 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 FOXK1P85037 733 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 ITGA9Q13797 1035 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 IL11RAQ14626 422 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 LONRF2Q1L5Z9 754 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 ZRANB3Q5FWF4 1079 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 DNTTIP2Q5QJE6 756 aaKnown RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 SNX20Q7Z614 316 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 PPP1R3BQ86XI6 285 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 TMTC1Q8IUR5 882 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 VRK3Q8IV63 474 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 CDKL3Q8IVW4 592 aaPredicted RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 ADGRF3Q8IZF5 1079 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 DTWD1Q8N5C7 304 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 C2orf73Q8N5S3 287 aaPredicted RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 SPC24Q8NBT2 197 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 OR52K1Q8NGK4 314 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 OR5AR1Q8NGP9 310 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 FLVCR1-AS1Q8TAF5 88 aa7.85□□□□□ -1.15
USP48-207ENST00000471752 C9orf43Q8TAL5 461 aaPredicted RBP7.85□□□□□ -1.15
USP48-207ENST00000471752 SLC35B2Q8TB61 432 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms