RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 C17orf113A0A1B0GUU1 675 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 MATN2O00339 956 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 SCRG1O75711 98 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 TJP3O95049 919 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 IPO7O95373 1038 aaKnown RBP17.03■□□□□ 0.32
COL7A1-208ENST00000470076 POLBP06746 335 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 PTPN4P29074 926 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 ZNF140P52738 457 aaPredicted RBP17.03■□□□□ 0.32
COL7A1-208ENST00000470076 RPS15P62841 145 aaKnown RBP17.03■□□□□ 0.32
COL7A1-208ENST00000470076 PRKAA1Q13131 559 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 IGFBP7Q16270 282 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 GPR33Q49SQ1 333 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 SYVN1Q86TM6 617 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 TMEM135Q86UB9 458 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 TMEM126BQ8IUX1 230 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 TEX19Q8NA77 164 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 CCDC110Q8TBZ0 833 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 THAP4Q8WY91 577 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 ZNF501Q96CX3 271 aaPredicted RBP17.03■□□□□ 0.32
COL7A1-208ENST00000470076 PANX2Q96RD6 677 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 TBL1YQ9BQ87 522 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 AKIRIN1Q9H9L7 192 aaPredicted RBP17.03■□□□□ 0.32
COL7A1-208ENST00000470076 LATS2Q9NRM7 1088 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 SOHLH2Q9NX45 425 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 TLK1Q9UKI8 766 aa17.03■□□□□ 0.32
COL7A1-208ENST00000470076 SPTBP11277 2137 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 RCCD1A6NED2 376 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 ATP1B2P14415 290 aaPredicted RBP17.02■□□□□ 0.32
COL7A1-208ENST00000470076 KPNA2P52292 529 aaKnown RBP17.02■□□□□ 0.32
COL7A1-208ENST00000470076 NAP1L1P55209 391 aaKnown RBP17.02■□□□□ 0.32
COL7A1-208ENST00000470076 TMPRSS15P98073 1019 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 SEMA5AQ13591 1074 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 GPR19Q15760 415 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 UGT8Q16880 541 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 DENND5AQ6IQ26 1287 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 FAM199XQ6PEV8 388 aaPredicted RBP17.02■□□□□ 0.32
COL7A1-208ENST00000470076 ASB18Q6ZVZ8 466 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 KLHDC8BQ8IXV7 354 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 LILRA3Q8N6C8 439 aaPredicted RBP17.02■□□□□ 0.32
COL7A1-208ENST00000470076 ACVR1CQ8NER5 493 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 OR4E2Q8NGC2 313 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 FAM118BQ9BPY3 351 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 VPS37BQ9H9H4 285 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 FANCEQ9HB96 536 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 C1GALT1Q9NS00 363 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 POMT2Q9UKY4 750 aa17.02■□□□□ 0.32
COL7A1-208ENST00000470076 PIKFYVEQ9Y2I7 2098 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 SEC16AO15027 2179 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 IGLV3-16A0A075B6K0 115 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 BTNL10A8MVZ5 291 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 K7EM74 188 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 LDB2O43679 373 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 KLK3P07288 261 aaPredicted RBP17.01■□□□□ 0.31
COL7A1-208ENST00000470076 POLR2CP19387 275 aaPredicted RBP17.01■□□□□ 0.31
COL7A1-208ENST00000470076 NR1D1P20393 614 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 CDH3P22223 829 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 ARCN1P48444 511 aaKnown RBP17.01■□□□□ 0.31
COL7A1-208ENST00000470076 GSDMDP57764 484 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 ZNF517Q6ZMY9 492 aaPredicted RBP17.01■□□□□ 0.31
COL7A1-208ENST00000470076 TMTC1Q8IUR5 882 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 LCN9Q8WX39 176 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 MR1Q95460 341 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 LRFN5Q96NI6 719 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 RUFY1Q96T51 708 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 SRMSQ9H3Y6 488 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 FAM96AQ9H5X1 160 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 COG4Q9H9E3 785 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 SYTL2Q9HCH5 934 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 ZDHHC3Q9NYG2 299 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 FARSAQ9Y285 508 aaKnown RBP17.01■□□□□ 0.31
COL7A1-208ENST00000470076 DUSP10Q9Y6W6 482 aa17.01■□□□□ 0.31
COL7A1-208ENST00000470076 TRBV5-4A0A0C4DH59 114 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 SOWAHDA6NJG2 315 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 SLC9B1P1A6NJY1 282 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 CYSRT1A8MQ03 144 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 H7C0S8 307 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 IFRD1O00458 451 aaPredicted RBP17■□□□□ 0.31
COL7A1-208ENST00000470076 MC4RP32245 332 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 CD151P48509 253 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 RPS18P62269 152 aaKnown RBP17■□□□□ 0.31
COL7A1-208ENST00000470076 GPS2Q13227 327 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 LAMB3Q13751 1172 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 UBAP2LQ14157 1087 aaKnown RBP17■□□□□ 0.31
COL7A1-208ENST00000470076 SPARCL1Q14515 664 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 IZUMO3Q5VZ72 239 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 ZNF449Q6P9G9 518 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 CPT1BQ92523 772 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 ALG3Q92685 438 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 PPM1MQ96MI6 270 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 FERD3LQ96RJ6 166 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 OR52A5Q9H2C5 316 aa17■□□□□ 0.31
COL7A1-208ENST00000470076 PRRC2CQ9Y520 2896 aaKnown RBP17■□□□□ 0.31
COL7A1-208ENST00000470076 GOLGA6L9A6NEM1 432 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 MAP3K7O43318 606 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 GSTM1P09488 218 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 MSL3P1P0C860 447 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 ACRV1P26436 265 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 GSTM4Q03013 218 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 RPA4Q13156 261 aa16.99■□□□□ 0.31
COL7A1-208ENST00000470076 PARP6Q2NL67 630 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms