RNA–Protein interactions for RNA: ENST00000469939.1

TTC3-213, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-213ENST00000469939 RAD54LQ92698 747 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 SLAMF9Q96A28 289 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 SLC25A28Q96A46 364 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 CENPTQ96BT3 561 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 C5orf30Q96GV9 206 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 PRMT6Q96LA8 375 aaPredicted RBP4.22□□□□□ -1.73
TTC3-213ENST00000469939 OR6C1Q96RD1 312 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 SLC22A12Q96S37 553 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 SEPHS2Q99611 448 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 SH3GL2Q99962 352 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 SH2D3AQ9BRG2 576 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 HAUS8Q9BT25 410 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 QTRT1Q9BXR0 403 aaKnown RBP4.22□□□□□ -1.73
TTC3-213ENST00000469939 P2RY12Q9H244 342 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 FN3KQ9H479 309 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 KLHL31Q9H511 634 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 MYNNQ9NPC7 610 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 COMMD8Q9NX08 183 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 TBC1D7Q9P0N9 293 aa4.22□□□□□ -1.73
TTC3-213ENST00000469939 XPO7Q9UIA9 1087 aaKnown RBP4.22□□□□□ -1.73
TTC3-213ENST00000469939 TTC7AQ9ULT0 858 aaPredicted RBP4.22□□□□□ -1.73
TTC3-213ENST00000469939 COL3A1P02461 1466 aaPredicted RBP4.22□□□□□ -1.73
TTC3-213ENST00000469939 ZNF804BA4D1E1 1349 aa4.21□□□□□ -1.73
TTC3-213ENST00000469939 ZNF335Q9H4Z2 1342 aaPredicted RBP4.21□□□□□ -1.73
TTC3-213ENST00000469939 TRBV5-3A0A0A0MS03 114 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 C5orf51A6NDU8 294 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 FAM90A10PA6NDY2 464 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 TMEM189-UBE2V1I3L0A0 370 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 AP5Z1O43299 807 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 XRCC3O43542 346 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 FGBP02675 491 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 PLA2G4BP0C869 781 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 CD22P20273 847 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 PSMB4P28070 264 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 CAMLGP49069 296 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 ASCL1P50553 236 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 TKTL1P51854 596 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 RAD23BP54727 409 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 UCP2P55851 309 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 SNRPEP62304 92 aaKnown RBP4.21□□□□□ -1.74
TTC3-213ENST00000469939 CSNK2A1P68400 391 aaPredicted RBP4.21□□□□□ -1.74
TTC3-213ENST00000469939 SSBP2P81877 361 aaPredicted RBP4.21□□□□□ -1.74
TTC3-213ENST00000469939 CFHR1Q03591 330 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 MAD2L1Q13257 205 aaPredicted RBP4.21□□□□□ -1.74
TTC3-213ENST00000469939 UBE2V1Q13404 147 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 STIM1Q13586 685 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 SMTNL2Q2TAL5 461 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 EPHA10Q5JZY3 1008 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 DCST1Q5T197 706 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 ZDHHC20Q5W0Z9 365 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 ZNF626Q68DY1 528 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 PRR27Q6MZM9 219 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 SLC18B1Q6NT16 456 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 MIS18BP1Q6P0N0 1132 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 CASC4Q6P4E1 433 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 PODNL1Q6PEZ8 512 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 B3GNT6Q6ZMB0 384 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 NRROSQ86YC3 692 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 SLC38A9Q8NBW4 561 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 CSNK2A3Q8NEV1 391 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 IPMKQ8NFU5 416 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 B4GALNT2Q8NHY0 566 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.21□□□□□ -1.74
TTC3-213ENST00000469939 URGCPQ8TCY9 931 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 LRRC8CQ8TDW0 803 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 RIT1Q92963 219 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 ORAI1Q96D31 301 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 SNRNP40Q96DI7 357 aaKnown RBP4.21□□□□□ -1.74
TTC3-213ENST00000469939 RBM18Q96H35 190 aaKnown RBP4.21□□□□□ -1.74
TTC3-213ENST00000469939 SPATA33Q96N06 139 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 SPATA13Q96N96 652 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 KLHL5Q96PQ7 755 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 FAM111AQ96PZ2 611 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 GTPBP2Q9BX10 602 aaKnown RBP4.21□□□□□ -1.74
TTC3-213ENST00000469939 MOV10L1Q9BXT6 1211 aaKnown RBP4.21□□□□□ -1.74
TTC3-213ENST00000469939 SLC29A3Q9BZD2 475 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 TSPY26PQ9H489 355 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 PDGFCQ9NRA1 345 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 PNPLA3Q9NST1 481 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 ZBTB40Q9NUA8 1239 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 SPG21Q9NZD8 308 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 HMG20BQ9P0W2 317 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 GMEB2Q9UKD1 530 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 AGO2Q9UKV8 859 aaKnown RBP4.21□□□□□ -1.74
TTC3-213ENST00000469939 TDRKHQ9Y2W6 561 aaKnown RBP4.21□□□□□ -1.74
TTC3-213ENST00000469939 WDR17Q8IZU2 1322 aa4.21□□□□□ -1.74
TTC3-213ENST00000469939 DHX29Q7Z478 1369 aaKnown RBP4.2□□□□□ -1.74
TTC3-213ENST00000469939 SMIM35A0A1B0GVV1 85 aa4.2□□□□□ -1.74
TTC3-213ENST00000469939 WDR91A4D1P6 747 aa4.2□□□□□ -1.74
TTC3-213ENST00000469939 B4DGG1 531 aa4.2□□□□□ -1.74
TTC3-213ENST00000469939 MEIS2O14770 477 aa4.2□□□□□ -1.74
TTC3-213ENST00000469939 SLC16A5O15375 505 aa4.2□□□□□ -1.74
TTC3-213ENST00000469939 TTI1O43156 1089 aa4.2□□□□□ -1.74
TTC3-213ENST00000469939 OR10H2O60403 315 aa4.2□□□□□ -1.74
TTC3-213ENST00000469939 TSPAN1O60635 241 aa4.2□□□□□ -1.74
TTC3-213ENST00000469939 ACSL3O95573 720 aa4.2□□□□□ -1.74
TTC3-213ENST00000469939 HEXBP07686 556 aa4.2□□□□□ -1.74
TTC3-213ENST00000469939 C8orf89P0DMQ9 161 aa4.2□□□□□ -1.74
TTC3-213ENST00000469939 FERP16591 822 aa4.2□□□□□ -1.74
TTC3-213ENST00000469939 MPZP25189 248 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms