RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 CLEC6AQ6EIG7 209 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 CDC42EP5Q6NZY7 148 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 HHIPL2Q6UWX4 724 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 KRT73Q86Y46 540 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 ZDHHC17Q8IUH5 632 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 CEP97Q8IW35 865 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 DTX3Q8N9I9 347 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 OR7D4Q8NG98 312 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 CIDECQ96AQ7 238 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 TESCQ96BS2 214 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 TMEM176AQ96HP8 235 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 RPRD1AQ96P16 312 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 DCLRE1CQ96SD1 692 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 KCTD15Q96SI1 283 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 LGMNQ99538 433 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 TMEM168Q9H0V1 697 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 CCSER2Q9H7U1 834 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 SMURF1Q9HCE7 757 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 LTB4R2Q9NPC1 389 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 TRHDEQ9UKU6 1024 aa8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 DIMT1Q9UNQ2 313 aaKnown RBP8.89□□□□□ -0.99
SMARCE1-207ENST00000469334 LTBP1Q14766 1721 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 A0A1W2PRG6 482 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 SLC35F4A4IF30 521 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 NEMP2A6NFY4 417 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 IFRD1O00458 451 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 STX16O14662 325 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 PI15O43692 258 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 MFSD11O43934 449 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 ZNF623O75123 536 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 SCO1O75880 301 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 PAPSS2O95340 614 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 AHSGP02765 367 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 CCNYL3P0C7X3 344 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 CHMP24386 653 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 HMGCLP35914 325 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 SOX10P56693 466 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 YBX1P67809 324 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 GNA13Q14344 377 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 MXD4Q14582 209 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 TAB1Q15750 504 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 FUT11Q495W5 492 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 ZNF678Q5SXM1 525 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 KANK2Q63ZY3 851 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 TYW3Q6IPR3 259 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 BRAT1Q6PJG6 821 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 ZPBP2Q6X784 338 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 PID1Q7Z2X4 250 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 DGLUCYQ7Z3D6 616 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 TSPYL5Q86VY4 417 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 RNF130Q86XS8 419 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 ADGRG3Q86Y34 549 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 FAM181AQ8N9Y4 354 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 OR8J3Q8NGG0 315 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 TWIST2Q8WVJ9 160 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 MYDGFQ969H8 173 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 TSPAN17Q96FV3 270 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 ZBTB45Q96K62 511 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 RPL10LQ96L21 214 aaKnown RBP8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 C1orf74Q96LT6 269 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 BRINP2Q9C0B6 783 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 SPNS1Q9H2V7 528 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 ACTR8Q9H981 624 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 CYP3A43Q9HB55 503 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 CYP4F12Q9HCS2 524 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 PAK6Q9NQU5 681 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 EXD2Q9NVH0 621 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 AIG1Q9NVV5 245 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 ERVK13-1Q9NX77 482 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 ZIM2Q9NZV7 527 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 KLHL8Q9P2G9 620 aaPredicted RBP8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 PCDHB5Q9Y5E4 795 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 PCDHA10Q9Y5I2 948 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 GMPPBQ9Y5P6 360 aa8.88□□□□□ -0.99
SMARCE1-207ENST00000469334 A0A0U1RQS6 177 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 FAM234BA2RU67 622 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 B4DXG7 233 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 NT5C1B-RDH14C9J2C7 533 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 M0R082 166 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 ACKR2O00590 384 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 UBFD1O14562 309 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 TSPAN4O14817 238 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 KPNA6O60684 536 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 CILPO75339 1184 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 SEC22BO75396 215 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 VPS26AO75436 327 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 SCELO95171 688 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 STBD1O95210 358 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 TSPAN12O95859 305 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 WDPCPO95876 746 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 MT-CO1P00395 513 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 PRKCBP05771 671 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 HOXD4P09016 255 aaPredicted RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 TGFB3P10600 412 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 HGFP14210 728 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 CYP2B6P20813 491 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 KRT20P35900 424 aa8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 BRCA1P38398 1863 aaKnown RBP8.87□□□□□ -0.99
SMARCE1-207ENST00000469334 KCNC1P48547 511 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms