RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 RFTN2Q52LD8 501 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 FAM117BQ6P1L5 589 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 ZNF773Q6PK81 442 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 PDPRQ8NCN5 879 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 TBC1D15Q8TC07 691 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 SPATA17Q96L03 361 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 TUBA1CQ9BQE3 449 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 C17orf80Q9BSJ5 609 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 ADGRE3Q9BY15 652 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 FANCEQ9HB96 536 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 COMMD8Q9NX08 183 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 OR7A17O14581 309 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 GALTP07902 379 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 RHOCP08134 193 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 ZDHHC11BP0C7U3 371 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 MATN1P21941 496 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 MTHFRP42898 656 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 PTGER3P43115 390 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 SLC11A2P49281 568 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 ATN1P54259 1190 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 CCDC92Q53HC0 331 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 TMEM53Q6P2H8 277 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 XKR5Q6UX68 686 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 Q6ZNX1 250 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 DENND1CQ8IV53 801 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 C17orf50Q8WW18 174 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 NACA2Q9H009 215 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 ANKRD28O15084 1053 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 PRSS23O95084 383 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 CPNE6O95741 557 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 GNRH1P01148 92 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 ESR1P03372 595 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 F11P03951 625 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 ALPLP05186 524 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 ATP5C1P36542 298 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 CLCN7P51798 805 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 GPR17Q13304 367 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 GTF2H2Q13888 395 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 ABRAXAS2Q15018 415 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 PCBP2Q15366 365 aaKnown RBP eCLIP15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 ZNF362Q5T0B9 420 aaPredicted RBP15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 GTF2H2CQ6P1K8 395 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 FIG4Q92562 907 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 ZNF583Q96ND8 569 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 ZMYM5Q9UJ78 669 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 DNMT3LQ9UJW3 386 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 TNPO3Q9Y5L0 923 aaKnown RBP15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 ST14Q9Y5Y6 855 aa15.53■□□□□ 0.08
TSPAN4-211ENST00000468468 IFRD1O00458 451 aaPredicted RBP15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 GSTA4O15217 222 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 ADAM12O43184 909 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 DFNA5O60443 496 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 FKTNO75072 461 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 S100BP04271 92 aaPredicted RBP15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 SLC2A4P14672 509 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 SGSHP51688 502 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 GRSF1Q12849 480 aaKnown RBP eCLIP15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 BNIP3Q12983 259 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 NPAS4Q8IUM7 802 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 TTC30BQ8N4P2 665 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 OR13F1Q8NGS4 319 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 ADNPQ9H2P0 1102 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 IPPKQ9H8X2 491 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 TBC1D23Q9NUY8 699 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 FAIMQ9NVQ4 179 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 VAPAQ9P0L0 249 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 TMEM9Q9P0T7 183 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 EVLQ9UI08 416 aaPredicted RBP15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 TRIM17Q9Y577 477 aa15.52■□□□□ 0.08
TSPAN4-211ENST00000468468 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 SLC38A8A6NNN8 435 aa15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 TSPAN3O60637 253 aa15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 KCNH1O95259 989 aa15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 MBL2P11226 248 aaPredicted RBP15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 RPL17P18621 184 aaKnown RBP15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 MAP4P27816 1152 aaKnown RBP15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 VEGFBP49765 207 aa15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 TRAF2Q12933 501 aa15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 ZNF177Q13360 481 aaPredicted RBP15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 BROXQ5VW32 411 aa15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 MILR1Q7Z6M3 343 aa15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 FAM86B1Q8N7N1 296 aa15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 PDZD8Q8NEN9 1154 aa15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 FBXO30Q8TB52 745 aa15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 BORCS5Q969J3 196 aa15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 PPP1R14BQ96C90 147 aa15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 CNDP2Q96KP4 475 aaKnown RBP15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 CARS2Q9HA77 564 aaKnown RBP15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 DHRS7Q9Y394 339 aa15.52■□□□□ 0.07
TSPAN4-211ENST00000468468 TMEM247A6NEH6 219 aa15.51■□□□□ 0.07
TSPAN4-211ENST00000468468 TRIM64BA6NI03 449 aa15.51■□□□□ 0.07
TSPAN4-211ENST00000468468 CLDN11O75508 207 aa15.51■□□□□ 0.07
TSPAN4-211ENST00000468468 GJB5O95377 273 aa15.51■□□□□ 0.07
TSPAN4-211ENST00000468468 TFPTP0C1Z6 253 aa15.51■□□□□ 0.07
TSPAN4-211ENST00000468468 ZNF829Q3KNS6 432 aaPredicted RBP15.51■□□□□ 0.07
TSPAN4-211ENST00000468468 ANKRD26P1Q6NSI1 321 aa15.51■□□□□ 0.07
TSPAN4-211ENST00000468468 ENPP6Q6UWR7 440 aa15.51■□□□□ 0.07
TSPAN4-211ENST00000468468 LINGO4Q6UY18 593 aa15.51■□□□□ 0.07
TSPAN4-211ENST00000468468 C16orf59Q7L2K0 433 aa15.51■□□□□ 0.07
TSPAN4-211ENST00000468468 THAP5Q7Z6K1 395 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms